Fusarium vanettenii: NECHADRAFT_123400
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Entry
NECHADRAFT_123400 CDS
T01612
Symbol
GTA2101
Name
(RefSeq) transcription initiation protein
KO
K15172
transcription elongation factor SPT5
Organism
nhe
Fusarium vanettenii
Pathway
nhe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NECHADRAFT_123400 (GTA2101)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhe03021
]
NECHADRAFT_123400 (GTA2101)
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_123400 (GTA2101)
Transcription machinery [BR:
nhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NECHADRAFT_123400 (GTA2101)
RNA polymerase I system
NECHADRAFT_123400 (GTA2101)
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NECHADRAFT_123400 (GTA2101)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5_N
Spt5-NGN
CTD
KOWx_SPT5
KOW5_SPT5
KOW4_SPT5
KOW2_Spt5
KOW1_SPT5
KOW
DUF3912
Motif
Other DBs
NCBI-GeneID:
9670256
NCBI-ProteinID:
XP_003043894
JGI:
123400
UniProt:
C7ZD96
LinkDB
All DBs
Position
9
AA seq
1053 aa
AA seq
DB search
MSSHDPSRFDDSEDEEDFNPAPADVSDEEQDGDDQQSRSRARDSSPAHRDDDDEDERPAR
SRHVDDDEEEEDEEEDDDGGRRRNDDDDEDEEEEDDEDEDVQQGHRRKRRKERGANFFDI
EAEVDDEDEGEDDEVLGEEIGDFIANEHPDDMPGSGGINDDRRHRELDRRRDMESSMDAE
KQAEILRQRYGNRRSGKGFRDATIVPKRLLLPSVDDPSIWAVRCKEGKEREVVFSIMKRI
EERAGTKDELAITAAFERGGTESVMKGFIYVEALRQTDIMRALDSMLNVYPHSKMVLVEI
KDMPELFRVQKTPTLAPGAWVRLKRPMKHSGDLAQVIDVTENGLEARVRFIPRLDYGMRD
DAFTGVTADGKRKRPFGASAGPRPPQRLFSEIEARKRHPRHIQGNPTTNTWQYMGDEFEN
GFQVKDIKIQQLTVAGVEPSLEEVTRFASNAEDGTENLDLKALAASLKDSGARATYLPGD
IVEVYTGEQKGVVGKAMRVQTDVVSITVTEGDLVGQEIDVPIRALRKRFRVGDHVKVIGG
SKFRDEVGMVVKIQDDRVTLLSDQTNAEITVFSKDLREASDIGGQGSLGQYSLHDLVQLD
PTTVGCVVKVDRESLVVLDQFGDNRQVMPSQIANKLPKRKNAVAADRNGSEIRFEDVVKE
YTGQQRQGKIIHIHRSYVFLHTNDSKENAGVFVTKASMVNTIAAKGGRVSGGSSGPDLNA
MNPALKLHKNGNENKPVQPVKSFGRDKAIDQTVIIKKGAYKGLLGIVKDTTDTHARVELH
TKSKTITVPKDCLSFKNKTTGATIEISGRGRGGYSGGAGRGGDRVPGWQGGSRTPMASGG
SDRVPAWGSRTPAAGGRTPAWKAHDMSGARTPAWADGSRTVNPYDGNRTAYGSGSRTPAW
QAGGRTPAPGDAFGAGSRTPAYGGGDSWGSGSKTPAWGVSAPTPGASGNDSWGYTPGASG
SAYDAPTPGAALGAPTPGAMNAPTPGAYSAPTPAVNAPTPGGWQGGWGADSAPTPAAGAP
TPAASGYYGAPTPAAYGAPETPAASGPRYTDDD
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcatgacccttcgcgcttcgacgactcggaggatgaggaggatttcaatccc
gcgccagccgacgtttctgacgaggagcaagatggtgatgatcaacaatcgagatcgcga
gctcgtgacagcagccctgcgcatcgtgatgacgacgatgaggacgagcgacctgcaaga
tcgcgacatgtcgacgacgacgaagaggaggaggacgaagaagaagatgatgacggtgga
agacgccgcaatgatgatgatgacgaggatgaagaggaggaagatgacgaagacgaggat
gtccagcaggggcatcgtcgaaagcgccgcaaggagagaggcgccaatttcttcgatatc
gaagccgaagtcgacgacgaggatgaaggagaggacgacgaagttcttggcgaggagata
ggagactttatcgccaacgaacatcccgacgacatgcctggatctggtggaatcaatgac
gaccgacgacatcgcgagctcgatcgacgccgagatatggaatcgagcatggatgctgag
aagcaggcagaaatcctgcgacagagatacggtaaccgacgctcgggcaagggcttccga
gacgctaccatcgtcccgaagcgactcctcctccccagtgttgatgaccccagtatctgg
gctgtccgatgtaaagaaggcaaagagcgagaggttgtcttttccatcatgaagcgcatt
gaggagcgagctggtaccaaggatgagctcgccatcactgctgcttttgagcgcggtggc
accgaatcggtgatgaagggcttcatctacgtcgaggcgctacgccagaccgacattatg
agagcattggacagtatgcttaatgtgtatccccactccaagatggttctggtcgagatc
aaggatatgcctgagctcttccgagttcaaaagacacctactttggctcctggcgcctgg
gtccgtcttaagaggcctatgaagcacagcggagatctggcgcaagtcatcgacgttact
gagaatggtctggaggctcgtgttcgctttattcccagactggactatggtatgcgcgac
gacgcctttacaggagttactgccgacggcaaacgtaagcgaccctttggcgccagcgca
ggtcctcgaccgccgcagagactgttcagcgagattgaggctcgaaagagacacccgcga
cacatccagggaaaccccaccaccaacacttggcaatacatgggcgacgaatttgagaat
gggttccaagttaaggatatcaagattcagcagcttactgttgccggagtcgagccatct
cttgaagaagtcacacgattcgcctctaatgccgaggatggcactgagaacctggacctg
aaggccttggcagctagcttgaaggatagtggagctcgagctacatacctgcctggcgac
attgtcgaggtctacactggtgaacagaagggtgtggtgggtaaggcgatgagagttcaa
accgatgtcgtgtccatcacggttaccgagggtgacctcgtgggccaggagattgatgtt
cccatcagggctctgcgcaagcggttcagagtcggtgaccatgtcaaggtcatcggtggt
agcaagttccgagatgaggtcggaatggttgtcaagatccaggacgatcgagtaactctc
ctgtcggatcagaccaacgctgaaatcaccgtcttcagcaaggatcttcgcgaagccagc
gacattggtggacaaggttctctcggccagtactcacttcacgacctcgttcagttggat
cccaccactgtgggttgtgttgtcaaggtcgaccgcgagtcgcttgttgttctcgaccag
ttcggagacaatcgccaggtgatgccatcgcaaatcgccaacaagcttccgaagcgaaag
aacgccgtggctgccgaccggaatggctccgagattcgatttgaggatgtcgtcaaggag
tacacgggtcaacagcgtcagggcaagatcatccacatccatcgctcgtatgtgttcttg
cacaccaacgacagcaaggagaatgcgggcgtctttgtcaccaaggccagcatggtcaac
accattgcggccaagggtggccgagtcagtggcggatcatcagggccagacttgaacgcc
atgaacccagcgctcaagctccacaagaacggcaatgagaacaagcccgttcaacccgtc
aaatcctttggccgtgacaaggcgattgaccagactgttattatcaagaagggcgcctac
aagggtctactgggtattgtcaaggacacgacagacacacatgctcgtgtcgaactgcat
acgaagagcaagacgatcacagtcccgaaagactgcctgagcttcaagaacaagactaca
ggagctacaattgagattagtggccgaggccgtggaggctactcgggaggcgctggacgg
ggtggtgacagagtaccaggatggcagggaggttctcgcacgcccatggcctctggtggc
tcggatcgggtgcctgcctggggatcacgaacgcccgcagcaggtggccgaacaccggcc
tggaaggctcacgatatgtccggagcacgcacacccgcttgggccgatggctctcgaacg
gtcaacccctatgatgggaaccgaactgcctacggctctggctcgcgcacacctgcctgg
caggctggaggcagaactcctgcccctggagatgcctttggtgctggatcacgcaccccg
gcttacggtggaggagacagttggggatcaggttccaagacccctgcttggggagtgtcg
gcaccaaccccgggagccagcggcaacgactcatggggttacacacccggtgcatctggc
tcagcctacgatgctcctacacccggagcagccctcggggcaccaactcctggcgcgatg
aacgcccctacgccaggcgcctactcggctcccacacccgcagtcaacgcacctactcct
ggaggctggcagggtggatggggagcagactcggcccctactccggcggctggagctccc
acgccagctgcaagtggctactacggcgctcctacgcctgcagcctatggagcaccagag
actcccgcagcttctggtcctcgatacacagacgatgactga
DBGET
integrated database retrieval system
