KEGG   Fusarium vanettenii: NECHADRAFT_30000
Entry
NECHADRAFT_30000  CDS       T01612                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
nhe  Fusarium vanettenii
Pathway
nhe03020  RNA polymerase
nhe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nhe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NECHADRAFT_30000
  09124 Replication and repair
   03420 Nucleotide excision repair
    NECHADRAFT_30000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nhe03021]
    NECHADRAFT_30000
   03400 DNA repair and recombination proteins [BR:nhe03400]
    NECHADRAFT_30000
Transcription machinery [BR:nhe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     NECHADRAFT_30000
DNA repair and recombination proteins [BR:nhe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NECHADRAFT_30000
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L Calycin_like
Other DBs
NCBI-GeneID: 9677249
NCBI-ProteinID: XP_003049900
JGI: 30000
UniProt: C7YWI1
LinkDB
Position
1
AA seq 335 aa
MDYDPMVMDGEPEQPQVKISAADHTHVDFELSKTNLAFANALRRVIQAEVPTIAIDLVEI
EINSSVLADEFIAHRLGLIPLDSKGVGELNNSRDCDCEQYCEQCSVTLNLHAKCTSDEIM
KVYARDLVVDGRHANSVGSPVITDPEGYGCLIAKLRKDQELKITCIAKKGIAKEHAKWMP
TSAVGFEYDPHNKLHHLDMWFENDTDPEVEWPKSKYAQWEDPPQEGEPFDYDAVPNRFYF
EVETSGSMEPDQIVQSGIRVLQQKIGGLLKGLDPRKYGGDEAEFDGPRSPDMNMDGGTTP
WQDGGYTTPYGGNATAYGGGMTAYGTTPYGQSSWQ
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggactatgatcctatggttatggacggggagcctgagcagcctcaggtgaagatctct
gcggccgaccacacgcacgtcgactttgagctctccaagaccaaccttgcgttcgccaac
gcgctgcggcgcgtcatccaggcagaggtgcccaccatcgccattgacctggtcgagatc
gagattaacagctccgtgctggccgacgagttcatcgcccaccgcctgggcctcatcccg
ctcgactccaagggcgtgggcgagctcaacaactcgcgagactgcgactgcgagcagtac
tgcgagcagtgcagcgttactcttaacctgcacgccaagtgtacctcggacgagatcatg
aaggtgtatgcccgcgaccttgtagttgacggtaggcacgccaactcggtcggcagcccc
gtcatcaccgaccccgagggctacggatgcctgatcgccaagctgcgcaaggatcaagag
ctcaagatcacctgcatcgcaaagaagggtatcgcaaaggaacacgctaagtggatgcct
acctcggccgtcggattcgagtacgatcctcacaacaagctgcaccatctcgacatgtgg
ttcgagaatgacacagatcctgaagttgaatggcccaagagcaaatacgcacagtgggaa
gaccctccacaagaaggcgagccctttgactacgatgcagtccccaaccggttctacttt
gaggtggaaacatcaggaagcatggagcctgatcagatcgtgcagagcggtatccgagta
ctgcagcaaaagattggcggcctcctcaagggtcttgaccctaggaagtacggaggcgat
gaggccgagttcgacggaccccggagccctgatatgaacatggacggaggcacgacgccc
tggcaagacgggggctacaccacaccgtacggcggcaacgccacggcctacggcgggggg
atgacggcttacgggacgacaccttatggacagtcctcgtggcagtga

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