Fusarium vanettenii: NECHADRAFT_31391
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Entry
NECHADRAFT_31391 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
nhe
Fusarium vanettenii
Pathway
nhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NECHADRAFT_31391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhe03021
]
NECHADRAFT_31391
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_31391
Transcription machinery [BR:
nhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NECHADRAFT_31391
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
NECHADRAFT_31391
U7-dependent histone pre-mRNA processing factors
NECHADRAFT_31391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
9664594
NCBI-ProteinID:
XP_003054363
JGI:
31391
UniProt:
C7YHJ2
LinkDB
All DBs
Position
1
AA seq
677 aa
AA seq
DB search
MTANLSVSDQIRQLNDARKLVLGDVKYYPSIVRGILPIIGPNAAIELRRWGAEFLAEAFA
TPALPNGEKETMQPYVLATLESMMENDREDPQVIRSVIQCAASIYPLALRWIINNSYDTI
TWQRMVSIKQKVLRIWDNAAPSVRICCIKFAQRVVLAQSVASGAELRVCDALVVDATLNC
LSILVRTRPATSNRVVNALLNFNPLKLANSPLTPKTRVMMRSMEKTSRLLLIHLMKRDPH
NPMTPRIQQHVERMMRTMAEIFDDSGRKRPLAAQHHDGYDAKRQRLTPAQIQVPPLGPGT
HSLADVFTLIDNDALRNFDIFQVPAPMVAKIAITTLASIDQQVLAKAVDGIRGRLDALAS
APAPELNPNTAPLGVDEDDDDYEPDFYQAEDTEQILNKLDSSAVHDASSGLEDSLALKSF
HLHQPQALTPETALTAGNGTVTRVIEMMKSLEDPSKKSKAGFSRLAASSGNRDSWMTILA
RLATRSVAGLEGVSVKEEGDPSAPQSLSSNIRDVLYAYVMEDFRKHIDVAVSWLCEEWYN
DKLQQKSGGDRALHYEKCCLRLIDGFLPYLNAQDKVLTRFLSEIPELNRNILSRVKHMCR
DPSIVQLALTSLLYLVMMRPPIKEVALDTVQDIWTEFEEARPMAGKYLSKYRPAFMEAAR
EAAGDNAGQTTAPAIAA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgaacctatcagtgtcggaccagatccggcagctcaacgatgcccgaaagctc
gtcctgggagacgtcaaatactatccaagcatcgtcagagggatcctccccatcattgga
ccgaacgcggcgatcgaactccgacgatggggcgccgaattcctcgccgaggcctttgcg
acgccagccctgccgaacggagagaaggagacgatgcagccctacgtattggcgacacta
gaatcgatgatggagaatgatcgagaagacccccaagtcatccggagcgtgatccagtgc
gctgccagcatctatccgctggccttgaggtggatcataaataacagctacgatacgatt
acgtggcagagaatggtgtcaatcaagcagaaggttttacggatatgggacaatgcagcc
ccttccgtgaggatctgctgcatcaagtttgcgcaacgtgtggttttggcgcagagtgtc
gcttctggtgctgagctcagagtatgtgatgcactggtcgtagatgcgacgctcaattgc
ttgtctattctcgtgagaacgcgcccggcaacatcgaatcgagttgttaatgctcttctc
aacttcaaccccctcaagctcgcaaactcacccctcacacccaaaactcgcgtcatgatg
agatcgatggaaaagacaagtcgactgctcttgatccatctaatgaagcgagatcctcac
aaccccatgacacccaggattcagcagcacgtagaacgcatgatgcgcaccatggctgag
atattcgacgactcgggaaggaaacggcctctcgcggcacagcatcatgacggatatgat
gccaaacgacaacgcttgacccccgcccagatccaggtgcccccgctgggtcctggcacg
cacagcctggcagatgtgtttacattgatcgataatgacgctctaaggaactttgacatc
ttccaagtccctgcaccaatggtggccaagatcgcaatcacgacgcttgcgagtatcgat
cagcaagtgttggccaaggcggttgatggtatccgtggacgtctagacgcccttgccagt
gctccagctcccgaactgaaccccaatactgccccgctgggtgtggatgaagatgacgac
gactacgagcccgacttttaccaggctgaggatacagaacagattctcaacaagctagat
agctctgctgttcacgatgcgtcatcaggtctagaggatagccttgcgttgaagtcgttc
caccttcaccaacctcaggcactaacaccggaaacggctctaacagcgggtaacgggact
gtgacgcgggtgattgagatgatgaaatctttagaggatccctcaaagaagagcaaggct
ggtttcagtaggctagctgccagctctggaaaccgagactcgtggatgacgatactggca
cgactggcgacacggtcagtggctggcctcgagggagtatctgtgaaggaggagggcgac
ccatcagcaccgcaatccctcagcagtaacatccgcgacgttctttatgcctacgtgatg
gaggactttcgaaaacacatcgacgtggcagtttcttggctgtgtgaagagtggtacaac
gacaagctacagcagaagtcaggcggcgatcgagcgctgcattacgaaaagtgctgcttg
cggctgattgatggattcttgccatatctgaacgcccaggacaaggtgctcacgcgattc
ctgagtgagattccggaactgaaccggaatattctctctcgggtgaagcacatgtgtcgc
gatcccagcattgtgcagttggccctaacaagcctgctctacttggtcatgatgcgaccg
cctatcaaggaggttgctctagatacggtgcaagatatttggaccgagttcgaggaggcg
aggcctatggcgggcaagtatttgtccaagtatcggcctgctttcatggaggcggcacgg
gaggcagctggcgacaatgctgggcagacgacagcacctgcaatcgcagcttga
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integrated database retrieval system
