Fusarium vanettenii: NECHADRAFT_36895 Help Entry NECHADRAFT_36895  CDS       T01612                                  Name (RefSeq) hypothetical protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism nhe  Fusarium vanettenii Pathway nhe03018   RNA degradation Brite KEGG Orthology (KO) [BR:nhe00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     NECHADRAFT_36895  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nhe03019]     NECHADRAFT_36895 Enzymes [BR:nhe01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      NECHADRAFT_36895 Messenger RNA biogenesis [BR:nhe03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      NECHADRAFT_36895   mRNA degradation factors    3'-5' decay     Ski complex      NECHADRAFT_36895 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel MTR4-like_stalk DEXQc_Suv3 Helicase_C ResIII Cut8 DUF6211 Ski2_beta-barrel Motif Other DBs NCBI-GeneID:  9675424 NCBI-ProteinID:  XP_003041028 JGI:  36895 UniProt:  C7ZKY5 LinkDB All DBs Position 3 AA seq 1270 aa AA seqDB search MAGIDALLQGEQQGTGQRQPRTQEPDELKRSLEELLLTPSPEFSPEWLNRLQQRWDFEAD YTSLFKVAPPHTRTLTRFQRHGLEGRVTGYRNVTVPANSATAKNSTSLLRKPANRADFVR GAAGFFPFAPGGLEGIEATAAFEDQIHSGDIAKSSGSGNKLERVIQLGAEGGLLEIAPGM SRGIDFTKKTTVNEEDANAIKEVLEEDPEEAKAAPDASEDASPETATPDLTPDSGEDGDD IDSILPVEFPALEPHGVLAASSARKAGREWAHIVDINHDMSNFRELVPDMAREWPFELDT FQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSPIKALSNQKFRDF RQTFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDFER GVVWEEVIIMLPEHVSLILLSATVPNTYEFASWVGRTKQKDIYVISTPKRPVPLEHYLWA GKNIHKIVDSEKKFIEKGWKDAHHTIQGKDKPEAAKTTVATRGGNPRGNQRGGPQRGGPQ RGGRGGGQQRGGNQQRGRGGPPRASHAPGHMGRGGRAGGFTSVAQDKNLWVHLVQFLKKQ TLLPACIFVFSKKRCEENADALSNQDFCNATEKSHIHMIIEKSVARLKPEDRQLPQIIRL RELLSRGIAVHHGGLLPIVKELVEILFAQTLVKVLFATETFAMGLNLPTRTVVFSGYRKH DGHSFRNLLPGEYTQMAGRAGRRGLDTVGSVIIVPPGGLDDAPPVADLRNMILGEPSKLR SQFRLTYNMILNLLRVEALKIEEMIKRSFSEHATQQLLPEHEKDVKLAQADLAKVKRDSC EICDVSMDECHQAAQDFKRLTFELYKGMLAIPIGRRMFSSNRLIVFNWDGVRSVGILLAD GISNKGTSEDPTLHVCAIKSLRERRDATDQLPFIPAFTKYFHELPKSKKRMQTKTLHVPL SDVECLTRWVTKGILPEIFQGGDGYHQAKERLQELCGSWSDKWEELDLSRIKQLQLQEIV EKRVDLVKTISSSPATKCPNFLKHFAMCHDEWLIKEHISQLKQSLSDQNLQLLPDYEQRV QVLKELGFIDEATRIQLKGKVACEIHSGDELVLTELILDNVLADYEPAEIAALLSAFVFQ EKTDIEPSLTGNLERGRDTIVAISEKVNDVQTRLQVIQSTDDSNDFVSRPRFGLMEVVYE WARGMTFKNITGLTDVLEGTIVRTITRLDETCREVKNAARIVGDPELYQKMQQAQEMIKR DITAVASLYM NT seq 3813 nt NT seq  +upstreamnt  +downstreamnt atggctggtatagacgccctccttcaaggagagcaacaaggcaccggccagcgccaacct cgcacccaagaacctgatgagctgaagcgcagccttgaggagcttctcctcacaccctcg ccagagttctcgcccgaatggctcaaccgactgcagcaacgatgggattttgaggctgac tacacgtctctgttcaaggtggcaccgccgcacacgagaactctcactagatttcaacgc catggattggaaggtcgtgttacaggctacaggaacgtcacagtgcctgccaacagcgct accgccaagaattcgaccagcttgctacgaaaacctgccaatcgcgcagactttgtgaga ggtgctgctggattctttccttttgcgcctggtggtcttgagggcattgaagcaactgcg gcgtttgaagatcaaattcattctggagacattgccaagtcttctggttctggaaacaag ctggaaagggtgattcagctaggtgctgaaggtggcctgctcgagattgctcctgggatg agcagaggtatcgactttaccaagaaaacgaccgtcaacgaggaagatgcgaatgccatc aaggaggtgcttgaggaggatccggaggaagccaaggctgcacccgatgcgagcgaagac gcttctcctgaaactgctaccccagatctgacaccagactctggcgaagatggcgacgac attgacagcattcttcccgtcgagttcccggccttggagcctcatggcgtccttgcagcg tctagtgcccgcaaggctgggcgtgagtgggcgcacattgtcgatattaaccacgacatg tccaacttcagagaactcgttcccgacatggcgagggagtggcccttcgaactcgatacc tttcagaaggaggccgtttaccatctcgagaatggtgactccgtctttgtagctgcccat acttcagctggcaagacagtggtggcagagtatgcgatagccctagcggccaagcacatg acaaaggccatctatacctctcccatcaaggcgctgagcaaccaaaagttccgcgacttt cgacagactttcgatgaggtgggaattcttactggtgatgtccagatcaaccctgaggct agttgcctaatcatgacgaccgagattctgcgaagtatgctctaccgaggagctgacttg attcgagatgtcgagtttgttattttcgatgaagttcactatgtcaacgactttgaacgt ggtgtcgtgtgggaagaagtcattatcatgctgcctgagcatgtctccctcattctacta tcagccacggtgcccaatacctatgagtttgcctcgtgggtcggacggacaaagcagaag gacatctatgtcatctctacgccaaagagacctgtgcccctggagcactacctctgggct ggaaagaatatccacaagattgtggattcggagaagaagtttatcgagaagggctggaag gacgcacaccatactatccaaggaaaggataagcccgaggccgctaaaaccaccgttgca acccgaggaggcaacccacgaggaaaccagcgtggtggtccgcagcgaggaggaccccaa agaggtggccgaggagggggtcagcaaagaggaggaaaccagcaacgaggtcgtggagga cctcctcgagcaagccatgcccctggccacatgggccgtggaggccgcgcaggtggcttt acgtcggttgcgcaagacaagaacctctgggttcatcttgtccagttcctcaagaagcag accctcctcccggcctgtatctttgtcttctcaaagaagcgatgcgaggagaatgccgat gctctcagcaaccaggacttttgcaacgccacagagaagagtcatattcacatgattatc gaaaagtctgtggctcggttgaagccagaagacagacagctaccgcagattatcagacta cgagagctcctgagccgaggtattgctgttcaccatggcggactcttacccatcgtcaag gagctcgttgagattctgtttgcacagacacttgtcaaggtgctgttcgccacagaaaca tttgctatgggcctgaacctccctacacgaacagttgtcttttctggataccgcaagcat gacggacactcgttccgaaacctactacctggtgagtatacacagatggctggccgagct ggccgtcgtggtctggatactgttggatcagtcatcattgtcccccctggtggacttgac gacgctcctccggttgcagacctacgcaacatgattctgggagagccttcgaagctacga tcccagttccgactcacatacaacatgattctcaacctgctccgtgtggaagccttgaag atcgaagagatgattaagcgcagtttctctgagcatgctacacagcagctacttccagag cacgagaaggatgtcaagctggcacaggcagatctggcaaaggtcaagcgagactcttgt gagatttgtgatgtttcaatggatgagtgtcatcaggccgcccaagatttcaagcgactc acattcgagttgtacaagggcatgttggccatcccaatcggccgcagaatgttctcctcg aaccgcctcattgtgttcaactgggacggtgttcgttccgttggcattctcctagcggac ggtattagcaacaagggcacgtcggaggatccaacactgcacgtctgtgccatcaagtcc ctccgagagcgacgcgacgcaaccgaccagctcccctttattcctgccttcaccaagtat ttccatgagcttcccaagagcaagaagcggatgcaaaccaagacccttcacgttccgctg agtgacgtggagtgtctcaccagatgggtaaccaagggtattcttccagagattttccag ggcggtgacggctatcaccaagccaaggaacgtcttcaggagctctgcggctcatggagt gataaatgggaggagcttgatctctcgcggatcaagcagctccaactgcaagagattgta gaaaagagggtcgacctggtcaagacgatatcaagctcaccagctacgaagtgtccaaac ttcttgaagcattttgccatgtgtcacgatgagtggctcatcaaggagcacatttctcag ttgaagcagtctctgtcggatcagaacctccaacttttgcctgattacgagcagcgtgtt caggtattgaaggagctcggcttcatcgatgaggcaactcgtattcagctcaagggcaag gttgcttgtgagatccactcgggagacgagctggtcctcaccgaactcatccttgacaat gtgctcgctgactacgagcctgccgaaatcgccgctcttctgtcggcgtttgtgttccag gaaaagacggacattgaaccctcactcactggcaaccttgagcgcggccgtgatactatt gtcgccatctcggagaaggtcaatgatgtgcaaacacggctgcaggtgattcagtccacc gacgactccaacgactttgtttcacgaccccgttttggcctcatggaggtcgtgtacgaa tgggcgaggggcatgaccttcaagaatatcaccggcttgaccgatgtgctggagggaact attgtgcgaacgatcacgcgactggacgagacatgtcgtgaggtgaagaacgcggcgagg attgttggtgatccagagctgtatcagaagatgcagcaggcgcaggagatgatcaagagg gatattacggcagtggctagtctttacatgtag

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