Fusarium vanettenii: NECHADRAFT_40276
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Entry
NECHADRAFT_40276 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
nhe
Fusarium vanettenii
Pathway
nhe03022
Basal transcription factors
nhe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NECHADRAFT_40276
09124 Replication and repair
03420 Nucleotide excision repair
NECHADRAFT_40276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhe03021
]
NECHADRAFT_40276
03400 DNA repair and recombination proteins [BR:
nhe03400
]
NECHADRAFT_40276
Transcription machinery [BR:
nhe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NECHADRAFT_40276
DNA repair and recombination proteins [BR:
nhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NECHADRAFT_40276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Rogdi_lz
Motif
Other DBs
NCBI-GeneID:
9667337
NCBI-ProteinID:
XP_003047982
JGI:
40276
UniProt:
C7Z0W0
LinkDB
All DBs
Position
5
AA seq
355 aa
AA seq
DB search
MDAVDVSEHYEVSTHEDTPSLLTIVLDTNPRAWAAIGNALPLSRAIANILVFVNAHLAFS
NANQVALIAAHVDRAQWLYPTPPKPTRDASGDVSMKDAAPSQTSSANKFPQFAQIEAAVL
DSVRKLMDQTTEADLATTTTQLSGALTLALCHINKAAQALCSPTANLEDNHKATTTAPPT
VRGRILVISVSDSEPSQYIPTMNAVFAAAHAQVAIDTLSLTGDPTFLQQACFNTGGTYLA
ATHPQGLLTYLMFGLIADTEAREALVAPTHDTVDFRAACFCHGRVVDTGFVCSICLSIFC
ELPENSECLTCGTKLSLGNYGAKPAVVPRKKKKKRRIVNGGSREETGSATGTPRP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcgatgtttcggagcactacgaggtcagcacccacgaggacacgccctca
ctccttaccatcgtccttgacacgaatccgcgagcatgggctgctatcggtaatgccctg
cctttgtctagggccatcgcaaatatcctcgtctttgtcaacgcccatctcgccttcagc
aacgccaaccaggtcgccctcatcgccgcccacgtcgaccgcgcacaatggctctacccg
acgccgcccaagcccactcgcgacgcctcaggagatgtatctatgaaggacgccgccccg
tctcagacgtcgtcggccaacaagttcccccagtttgcgcagatcgaggccgccgttttg
gactctgtgaggaaactcatggatcagacgaccgaggctgacctcgccaccaccacgaca
caactatcaggggcattaacgctggccctctgccacatcaacaaggctgcgcaagctctc
tgctcgcccaccgccaacctcgaggacaaccacaaggccaccaccacggcacctcccacc
gtacgcggccgcatcctcgtcatctccgtgtccgactcggagccttcgcaatacatccct
accatgaacgctgttttcgccgccgcccacgcccaggtcgccatcgataccctctccctc
accggcgacccgacctttctccagcaggcctgcttcaacacgggcggtacatacctcgcc
gcaacacatccccagggtctgctcacctatctcatgttcggtctcatcgccgatacagag
gctcgcgaggctctcgttgcgccgacccatgacacggtcgactttcgcgcggcgtgcttc
tgccacggccgagttgttgacactggctttgtctgttccatctgcctcagcatcttttgc
gagctgccagagaattccgagtgccttacatgtggcacgaaattgtcgctgggcaactac
ggcgccaagcccgccgtcgtgcctcggaagaagaagaagaagcggagaatcgtcaacggg
ggttcacgggaagagacgggaagtgcgacggggacacctcgtccatga
DBGET
integrated database retrieval system