Fusarium vanettenii: NECHADRAFT_41283
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Entry
NECHADRAFT_41283 CDS
T01612
Symbol
GTB2101
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
nhe
Fusarium vanettenii
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhe03021
]
NECHADRAFT_41283 (GTB2101)
03036 Chromosome and associated proteins [BR:
nhe03036
]
NECHADRAFT_41283 (GTB2101)
Transcription machinery [BR:
nhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NECHADRAFT_41283 (GTB2101)
Chromosome and associated proteins [BR:
nhe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
NECHADRAFT_41283 (GTB2101)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
YqgF
Spt6_S1
Tex_central_region
SPT6_acidic
HHH_9
S1
SH2
HHH_3
Tex_YqgF
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
9667838
NCBI-ProteinID:
XP_003050763
JGI:
41283
UniProt:
C7YRB8
LinkDB
All DBs
Position
5
AA seq
1408 aa
AA seq
DB search
MSNSMRDLISGEAELDDEEDDESFDEDDGGNRKRRPAVEDSSEEEEDDDDEEEARKVREG
FIVDEDEDEDDVDEDDADVRPVVKRKREHRDREEEEQLDEDDLELIGEQFGERPKPQSQS
QYKRLKRGHRGEDRASEHRGLAEIFSDDEDDATEQRNYGRSYRGQVDEFEDFIEEDFPDD
PDVKAREMEDAEVARPRDRGVGHVIDTTNLDKDALDDMEAIFGNGEDYDWALQMEEEEED
REREEQAIELKDVFEPSQLKEKLLTDEDNEIRFTDEPERFQLDRKNFKNLQLTAEQFREE
ARWITNQLWPKKGLAADLQSPFGKAVGKVLEFFIVDEVEVPYVFQHRKDYLLHTRKTRNP
NRDDPDAPEYVISAEKLLNQDDLWKILELDIKFRSFVDKRNSLEKTFENLRGLDINDSIV
EEMIPEATTMEELQDLQDYLHFQYGPQLKDLAAMAGNLSLTKRPGSKSNLLERVRQGKAY
NFVRAYGVTADQLAKNALRQGKKVSPDDDAQYPMDLADSLIDDNFSTGDQVMSAARQMYA
EELFASPRMRKHFRNSYYQAAEISCRRTDKGLRRIDETHPYYEVKYLQNQAIADLVHQPE
LFLKMMKAEEEGLVSIKLDMPARYDFRRQLYQEFESENFSDRAEQWREERKKVLDLAYPK
LEKIIAKNVKEVIRTFCQDEVLKMCREEYAKRLDQAPYKPKGMILGTTPRVLVLSNGMSD
PARDPVCWAWVEEDGRVIEQGKFGNLARDERQREDFVEVVNRRRPDVIAVSGWSADTNKL
VRDLETLVTEKGLMGPEFEDPDTNDYRTEPLEVVVVNDEVARLYKDSPRALAEHPSLNPI
TRYCVALARYMQNPMKEYAALGRDVTSLSYHPCQNLLPPEKLAKYLDSAMVDMVNLCGVD
INEAITDSYTANLLPYVSGLGPRKASSVIKAINANGGAVNTRDELVGDPDSGKLPVVGPR
VWNNCASFLFIEYEATNPSSDPLDNTRVHPEDYELGRKMAADALELDEEDVKAETDENGP
GAIVRKLFKQDEQDKVNELVLEEYAEQLERNYSQRKRATLETIRAELQAPYEELRRNFGL
LTASEIFTMFTGETKLTLCDGMIVPVNVRIVKDDFAIVKLDCGIEGRVEAHEASHRASIK
EVLSVGQTAQAKILDINYKDFMAKLSMREDSLRIPYKRPINFGRDGWDYALEAADKDELR
EKDKTTGRTQRVVKHPNFKPFNGLQAEEYLGSQPNGEVIIRPSSKGNDHLAVTWKVADGV
YQHIDVLEMQKDTEFSVGKLLRVGGKYTYSDLDELIVEHVKAMVRKVEEMMRHDKFQSRS
RGETENWLTTYINANPNQSTYAFCIDTKHPGYFWLCFKANRAAKVIGLPVRTIPQGFELK
GYQYPDMRALCNGFKLRYQNEFSKMGRR
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagcatgcgcgatttaatctctggggaggccgagttggacgacgaggaggac
gacgagtcttttgacgaggatgatggtggcaaccgcaaacggagacctgccgtcgaagac
tcgagcgaggaggaggaagacgatgacgatgaagaggaagctcgcaaggttcgcgaaggt
ttcatcgtcgacgaggatgaagacgaagacgacgttgacgaggatgatgctgatgtgcga
cccgtggtcaaaagaaagcgagagcatcgcgaccgcgaagaggaagagcaactggatgaa
gatgatctagagctaatcggcgaacaatttggcgagcgacccaagcctcagagtcagtcc
cagtacaaacgtcttaagcgcggccaccgcggcgaagatcgcgcatccgaacatcgcggc
ctagcagaaatcttttccgacgacgaagatgatgcgaccgagcaacgaaactatggcagg
tcataccgaggacaggtcgacgagtttgaagactttatcgaagaggacttccccgacgac
cctgatgtgaaagcacgcgagatggaagatgccgaagtcgctcgacccagagatcgtggt
gttggtcatgtcattgacaccaccaatctggacaaggacgcgctggacgatatggaggct
atcttcggcaatggcgaggactacgactgggcactccagatggaggaggaggaagaggac
cgtgaaagggaggagcaggccatcgaactcaaggatgtctttgaaccgtcccagctgaag
gagaagctcctgaccgacgaggataacgagatccgcttcaccgacgagcctgaacgattc
caactcgaccgaaagaacttcaagaacctgcagctcaccgccgagcagttcagagaggag
gcacgatggattaccaaccagctttggccaaagaagggcctggctgccgatctgcagagc
ccattcggcaaagctgttggcaaagtcctcgagttcttcattgttgatgaggtggaagtg
ccctacgtcttccaacaccgcaaagactacctgcttcatactcgaaagacgcgcaacccc
aaccgcgacgatcccgatgcccctgaatatgtcatcagtgccgagaagctactgaaccaa
gatgacctctggaagattttggagttggatattaagttccgatctttcgtggacaagagg
aactctctcgaaaagacctttgagaaccttcgaggcttggatatcaacgactcaattgtg
gaggagatgattcccgaggccacaaccatggaggaactccaggatctgcaggactacttg
catttccagtatggaccccagctcaaagaccttgccgccatggctggcaacctgtccctt
acgaagcggccgggttctaagtcgaatctcctggagcgagtccgtcagggcaaggcatac
aacttcgttcgtgcctatggtgttaccgcggaccagcttgccaagaatgctttgcgacag
ggaaagaaggtgtctcctgacgatgacgctcaatatcctatggacttggccgacagcttg
attgatgataacttcagcacaggcgatcaggtcatgagtgcagctcgacagatgtatgca
gaggagttgtttgccagtccgagaatgcgcaagcatttccgaaactcctactaccaggct
gctgagatcagctgtcgacgaaccgacaagggactgcgcaggatcgacgaaactcaccct
tactacgaggtgaagtacttgcaaaaccaggccattgccgaccttgttcatcagcctgag
ctcttcctcaagatgatgaaggccgaggaggaaggcttggtcagcatcaagcttgatatg
cccgccagatatgacttccgcaggcagctctatcaggagtttgagtcggagaacttcagt
gatcgagcagaacaatggcgggaagaacgcaagaaggtgctcgacctcgcataccccaaa
ttggaaaagatcattgccaagaacgtcaaggaagtcatccgaacgttctgtcaggatgag
gtgctcaagatgtgccgagaagagtacgccaagcgactcgatcaggcgccttacaagccc
aagggcatgattttgggtaccactcctcgtgtactggttctctccaatggtatgagcgac
cctgctcgcgatcccgtctgttgggcttgggtcgaggaagatggccgagtgattgagcaa
ggaaagtttggcaatcttgcacgagacgagcgccagcgggaagactttgtcgaagttgtc
aaccgccgtcgacccgatgtgattgctgttagtggctggtctgccgacaccaacaagctc
gtgcgtgacctggagactctggttaccgagaagggcctcatgggtcctgagtttgaggac
cccgacacaaacgactaccgcacagagcctttggaggttgtggtagtgaacgacgaggtg
gctcgtctgtacaaggacagcccccgagcacttgccgagcacccaagcctcaaccccatc
acaaggtactgtgttgctctggcacgctacatgcagaaccccatgaaggagtacgccgcc
ctcggcagggatgttacctccctctcttaccacccgtgccagaacctcctccctccggag
aagctggccaagtatctcgactcggcgatggtcgacatggtcaacctgtgtggtgtggac
attaatgaagccataaccgatagttacactgccaacctcttgccgtacgtctcgggtctg
ggaccacgaaaagcctcgagcgttatcaaggcgatcaatgccaacggcggcgctgttaat
accagagatgagctcgttggcgatcccgatagcggcaagttgccagtcgtgggccctagg
gtgtggaacaactgcgcgagtttcctcttcatcgaatacgaggccactaacccgtcttct
gatcccttggataacacgcgtgtgcaccctgaagactacgaacttggccgcaagatggcg
gccgacgctctggagcttgacgaggaagacgtcaaggccgagacagacgagaacggccca
ggtgcaatcgtgcggaagctctttaagcaagatgagcaggacaaagtcaatgagcttgtt
ctggaggagtatgcagagcagcttgagaggaactacagtcaacgcaagcgagccactctg
gagacgatccgtgccgaactccaggctccttacgaggagctgcgaaggaactttggcctt
ttgacggcctcggagatctttaccatgtttacgggcgaaaccaagttgactctgtgcgac
ggcatgattgtgcccgtcaacgtgcgaattgtcaaggatgactttgccattgtcaagctt
gattgtggtatcgagggcagagtcgaggctcatgaagccagccaccgcgcgtccatcaag
gaggtgctcagcgttggacagacagcacaggctaagatcctggacatcaactacaaggat
ttcatggccaagctgtcaatgcgggaagactcgctgcggattccgtacaagcggccaatc
aactttggacgcgatgggtgggattacgccctcgaagcggcagacaaggacgagctgcgg
gagaaggacaagacaacgggccgaacgcagcgtgtggtcaagcatcccaacttcaagccg
ttcaacggtctccaggctgaggagtacctcggatcgcaacctaatggcgaggtgattatt
cgtccctcgtccaagggtaacgatcatctggcggtcacgtggaaggttgcggatggtgtc
taccagcacattgacgtgctggagatgcagaaggatacggaattctcagtgggcaagttg
ctgcgcgttggcggcaagtacacgtacagtgatctggacgagctgatcgtggagcatgtc
aaggccatggtgcgcaaggtggaggagatgatgcggcacgacaagttccagagccgatct
cggggagagacggagaactggctaacgacatacatcaacgccaacccaaatcagtcaacg
tacgcattctgcatcgacaccaagcaccctgggtacttctggctgtgcttcaaggccaac
cgggctgccaaggtgatagggctaccggtacgaacgatccctcagggctttgagctcaag
ggttaccagtaccccgacatgcgagcactgtgcaacggtttcaagctgcgataccaaaac
gagttttccaagatgggacgtcggtag
DBGET
integrated database retrieval system
