Fusarium vanettenii: NECHADRAFT_43758
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Entry
NECHADRAFT_43758 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
nhe
Fusarium vanettenii
Pathway
nhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NECHADRAFT_43758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_43758
03041 Spliceosome [BR:
nhe03041
]
NECHADRAFT_43758
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
NECHADRAFT_43758
Spliceosome [BR:
nhe03041
]
Complex B
Other components
Prp19-related factors
NECHADRAFT_43758
Complex C
NECHADRAFT_43758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_8
TPR_15
RPN7
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
9673034
NCBI-ProteinID:
XP_003044625
JGI:
43758
UniProt:
C7Z8Z6
LinkDB
All DBs
Position
6
AA seq
822 aa
AA seq
DB search
MAPIVATPIGARRQPQLHLVSNEDSVYEQDILRNPASVKPWLAYIEFKARHGTVVEQAYV
MERACAQLPRSYKLWKLYLVFRVKHVAKLNPAIFAAEYRKVNALFERALILLNKMPRIWE
MYLRFLTKQPLVTLTRRTFDRALRALPITQHNRIWAVYRPFANSAAGTTAVKIWRRYMQV
HPEDAEDFIELLVQTGLYTEAALKFIDILNNTRFNSKHGKGHYELWSEMVDLLVEHAAEI
ETGYETGIDAERIIRSGITRFADQRGKLWSGLATYWIRRGSFERARDVFEEGITTVMTVR
DFTLIFEAYTEFEESIIGALMEVASSRAEQGIEDENADFELDIRMMRFEQLMDRRPFLLN
DVLLRQNPNSVPEWEKRVALWGDNKKEVAQTYTDAIAAIQPKRAVGAFHQLWANYAKFYE
RGGDLRNARIIMEKAVKVPFKSVAELADMWIEWAEMELRNENFDDAVRIMAKAVQAPKRS
TVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSTLEETKKVYERIFELRIATPQTVVNYA
NLLEEHKYYEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQAVEDC
PPKFAKTIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLTS
TRPIYERAIAALPDVEAKDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPDFWTKW
EQFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQRRPGAAEDAEVVDAMAA
LERQSRAPQGFVAASTGPTGGKPVPAAVTSNPDAIEIDGLDD
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcccctattgtcgcaaccccgattggggcgcgcaggcagccgcaactgcaccttgtg
tccaacgaagattccgtctacgagcaagatatccttcgtaaccccgctagtgttaagcct
tggctagcatacattgaattcaaggcccgccatggcactgtggttgagcaagcatacgtg
atggagcgggcatgcgcccagctgcctcgatcttacaagctctggaagctatatcttgta
ttccgagtaaagcatgtggccaaactaaacccagcgatcttcgccgccgagtaccgcaag
gtcaacgccctcttcgaaagagctctgatcctactcaacaagatgccgaggatatgggaa
atgtatctgaggttcctgaccaagcagccgctcgtgaccttgacccgacgaaccttcgat
cgcgccctaagagcccttccgatcactcaacataaccgcatctgggctgtctatcggcct
ttcgccaactccgccgcgggaacaacggccgtaaagatctggcgacggtatatgcaagtt
catcccgaggatgccgaggacttcatcgagcttcttgtgcagacaggcctttatactgag
gctgccctgaaattcatcgacattctcaacaacactcgtttcaacagcaaacatgggaag
ggccattacgaactctggagcgagatggttgacctactcgtcgaacacgcagctgaaatc
gagactgggtacgagacggggatcgacgccgaacgcatcattagaagtggcatcactcga
tttgccgaccaaagaggaaagctctggtcagggttagcaacctactggatccgacgagga
agctttgagcgagcccgcgatgtgttcgaagagggcattaccaccgtcatgaccgtccga
gatttcaccctcatcttcgaggcctataccgagttcgaagagtccatcatcggcgctctc
atggaagtggcatcttcacgggctgaacaaggtatcgaggacgagaatgcggatttcgag
ttggatatcagaatgatgcgttttgaacaactcatggatcgccgaccttttcttctcaac
gatgtccttttgagacaaaaccctaacagtgtacccgaatgggagaagagggtggctctt
tggggtgacaacaagaaagaagttgcgcagacttataccgatgcgattgcggccattcag
ccaaaacgggctgttggtgcctttcatcaactctgggccaactacgccaagttttacgag
cgtggtggtgatttgcgaaatgctcgcatcatcatggagaaggctgtcaaggtccccttc
aagtccgtggctgagctcgctgacatgtggattgagtgggcagagatggagttgcggaac
gaaaactttgatgatgccgtccgaatcatggccaaggccgtacaggcgcccaaacgatct
accgtcgactacttcgatgaaaccctatcgccacagcaaagagttcacaagagctggaag
ctctggagcttctatgtcgatctcgtggagagcgtctcgaccctggaggagaccaagaag
gtgtacgaacgaatattcgagcttcgcattgcaacccctcagaccgtggtcaactacgcc
aacctgctggaagaacacaagtattatgaggagtcgttcaagatctacgaacgaggcctg
gatctcttcagctatcccgttgcctttgagctctggaacttatatctaaccaaggctgtt
gaccggaagattgggatcgaacgactgcgcgatctctttgagcaggctgtcgaagactgc
cctcccaagttcgcgaaaaccatttatctgatgtatggtaatctcgaagaggaacgtgga
ctagctcgacacgccatgcgcatttacgagcgagccacccgagcggttgcagacgaggac
cgtgccgacatgttcaacttttacatcacgaaatccgcatccaactttggccttacatcg
accaggccaatttatgagagggccattgcagctcttcctgatgtcgaagccaaggacatg
tgcctcaagtttgcagacatggagaagaggctgggtgaaatcgaccgagcccgcgcaatc
tacggacatgcttcccagttctgcgacccccgaaccaaccccgacttctggacgaaatgg
gagcaattcgaagtccagcacggcaacgaggacactttcaaagagatgttgcggatcaag
cgaagtgtgcaggcccagtacaacacggatgtcaatttcatcgcatcacaagcattggca
cgtagccaacgccggcccggtgctgcagaagatgctgaagttgtggacgcaatggcagca
ctggagagacagtcaagggcaccacaaggattcgtggcagcaagcacgggcccaacaggg
ggtaaaccggtgccggcagccgttacctcgaaccctgacgcgatcgagattgacggtctt
gatgattga
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integrated database retrieval system
