Fusarium vanettenii: NECHADRAFT_49375
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Entry
NECHADRAFT_49375 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
nhe
Fusarium vanettenii
Pathway
nhe03013
Nucleocytoplasmic transport
nhe03015
mRNA surveillance pathway
nhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NECHADRAFT_49375
09122 Translation
03013 Nucleocytoplasmic transport
NECHADRAFT_49375
03015 mRNA surveillance pathway
NECHADRAFT_49375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_49375
03041 Spliceosome [BR:
nhe03041
]
NECHADRAFT_49375
03009 Ribosome biogenesis [BR:
nhe03009
]
NECHADRAFT_49375
03012 Translation factors [BR:
nhe03012
]
NECHADRAFT_49375
Enzymes [BR:
nhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NECHADRAFT_49375
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NECHADRAFT_49375
mRNA cycle factors
Stress granule specific factors
NECHADRAFT_49375
Spliceosome [BR:
nhe03041
]
Complex C
Other components
EJC/TREX
NECHADRAFT_49375
Ribosome biogenesis [BR:
nhe03009
]
Eukaryotic type
90S particles
Helicases
NECHADRAFT_49375
Translation factors [BR:
nhe03012
]
Eukaryotic type
Initiation factors
eIF-4
NECHADRAFT_49375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
COG4_N
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
9674580
NCBI-ProteinID:
XP_003050220
JGI:
49375
UniProt:
C7YV26
LinkDB
All DBs
Position
9
AA seq
407 aa
AA seq
DB search
MAEGSGSGGGGIDRKADERMEFSTSKEVTVHPTFESMSLKAENLLRGIYAYGYESPSAVQ
SRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVINIAVRETQALVLSPTRELATQIQSV
VMALGDYMNVQCHACIGGTNVGEDIRKLDHGQHIVSGTPGRVADMIRRRHLRTRHIKMLV
LDEADELLNKGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDE
LTLEGLKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVS
SMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRI
GRSGRFGRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLIS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggctcaggctcaggtggaggcggaattgaccgcaaggccgatgagaggatg
gagttttccacctccaaggaggttactgttcatccgactttcgagtccatgtcgctgaag
gcagagaaccttcttcgcggcatctacgcttacggatacgaatctccctcggccgttcag
tctcgagccatcgtccaggtctgcaagggtcgcgacaccatcgcccaggctcagtctggt
accggaaagacggcgaccttttcgatcagcatgctgcaagttattaacatcgcagtgcga
gagactcaggcgcttgttctttctcccacgcgagagttggcgactcagattcagtctgtt
gttatggccctgggtgactacatgaacgtgcaatgtcacgcttgtatcggtggaaccaac
gttggcgaggatatccgcaagctcgaccacggacagcacatcgtctctggtactcctggt
cgtgtggccgacatgattagaagacgacatctgcgcaccagacacatcaagatgcttgtt
ctcgacgaagcggacgaactcctcaacaagggtttccgagagcagatctacgatgtttac
cgataccttcctcctgctactcaggttgtggttgtcagcgctactctcccctacgatgtc
ctcgacatgacgaccaagttcatgacggaccctgttcgcattcttgtcaagcgtgacgag
ttgaccctcgaaggtctcaagcagtactttatcgccgtcgagaaggaggactggaagttt
gatactctatgcgatctctacgacaccctgaccatcacgcaagccgtcatcttttgcaac
acacgccgcaaggtcgactggcttacggacaagatgcgagaggcaaactttaccgtcagc
agcatgcatggtgacatgcctcagaaggaacgagacagcattatgcaggacttccgtcag
ggtaacagccgagtactcatctcgaccgatgtgtgggctcgtggtatcgacgtgcagcag
gtcagcttggttatcaactacgatctgcctagcaaccgtgagaactacatccaccgtatc
ggtcgtagcggtcgattcggtcgcaagggtgttgcgatcaactttgtgactactgaggat
gtgcgcattctccgagacattgagttgtactactcgacccagatcgatgagatgcccatg
aacgttgcggatctcatctcataa
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integrated database retrieval system
