Fusarium vanettenii: NECHADRAFT_50282
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Entry
NECHADRAFT_50282 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
nhe
Fusarium vanettenii
Pathway
nhe03013
Nucleocytoplasmic transport
nhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NECHADRAFT_50282
03015 mRNA surveillance pathway
NECHADRAFT_50282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_50282
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NECHADRAFT_50282
mRNA cycle factors
P-body specific factors
NECHADRAFT_50282
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
RseA_C
Motif
Other DBs
NCBI-GeneID:
9677834
NCBI-ProteinID:
XP_003040094
JGI:
50282
UniProt:
C7ZPM9
LinkDB
All DBs
Position
10
AA seq
1125 aa
AA seq
DB search
MDRARKRELRALNDKAWDGEKDLFPFGKTLDSSLKKNTAFIKRLRTAITAATLSTFLQEI
RTLSLHKYLSEIISACYEGLCRLKSPGEIEAGVEIVSALHQRFGPSEFTEYLAWLLGKGM
ATPDKSILKALAPEAREKEEKERITRQRALLRVVTELWLVGVVRTLDDVSRPDDATKGAA
GKVAELKTRTNKGAGADPFPLEVLKDLLGYDREHANLPLLVIFVKSFGWDILGVKPSGAD
GRKTVEEDGTTEGNEDTNDEKDEGGMSSDSDQPFTEPEMRERFRSVLKKYFDDVKGHITR
DQKSIQSQARRNAEAYVKSGEVFEDRQANYEKQVKAQERLVSNAQVIADAIGADMPDLKD
SDDSLGAFNGSIGLVKTGDYLRSMGDGAGIWEDEDERRFYENLVDLKGKVPPILLEDGKK
KKTDTDEQVGKKIDPAEAAEAAKPADSADDQSTAIANRTIGAQVDALLARLPELTNKDVV
DQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWSRLVATLGRYMPDVPKGLVDYLD
AEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRMNIEILC
NLIENCGRYLLRNPETAPRMVSFLETLQRKKSVQHIGQPERMLIDNAVYYVDPPERPAIE
QKERTPMELFVRKLIYVDMTKRNYSKILKQIRRLHWEETEVVAILEKVFSKPGKVKYGSV
HLLGILLSALYRYHPAFVVKVIDNVIESVTFGLEQNDYRFYQRRIAEVKYLGELYNYRML
EHPVIFDTMYKIMTFGYGGPPIPGKFNPLDPPDDFFRIRLVATMLETCGMFFNRGAAGKK
LDYFLSFFQYYIFTKGPLPMDIEFLVQDTFHLTRPQWKLAANLDEAVKAFQLAVAQDQKS
AGLDKTADMDDATSDPSSDDDNGDNDDVDGDDNDDSASEEEDADDVEEESDSESTFEEEA
IVVTRQEEEVDPEDEADFEREYAKLMAESLESRKFERKQLFDVPLPVRAKNREAPSSAEG
ASNEAPPNHTMAFSLLTKKGNRQQTRTVELPSDSTFAIAMKNQQQAEREEQQRIKNLVLN
YDLQQNEDPDGGNERPATYYHNRLERSNKDRGQRSRKLQLSDVDW
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgcaaggaagcgcgaactgcgcgctttgaacgacaaggcatgggatggcgaa
aaagatctcttcccttttgggaagacgctcgactcgtctctcaagaagaataccgctttt
attaaacgactgcgaaccgccatcaccgctgctaccctcagcaccttcctccaggaaatc
cgaactctcagcttgcacaagtacctctccgagattatatccgcctgttatgaaggacta
tgcagactcaagtcgcccggcgagatcgaggctggcgtcgagattgtcagcgctctacac
cagcgcttcggtccgagcgagttcacggaatacctagcttggctgcttggcaagggcatg
gcgacaccagataagagtatcctcaaggctctggctcccgaagctcgcgagaaggaagag
aaggagcgcatcacccgccagcgcgcattgctccgtgtggtgaccgaactctggctggtt
ggtgttgtaaggactctcgacgatgtaagccgacccgacgatgcgacaaagggggcagca
ggcaaggtcgccgagctcaagactcgaacgaacaaaggtgccggtgcagaccccttccca
ttggaagtgcttaaggacctccttggatacgatcgcgaacacgcaaatctcccactcctc
gtcatctttgtcaagtcattcggctgggatattctaggggtcaagccgagtggtgcggat
ggacgaaaaacggttgaggaagacggcacaactgagggcaacgaggacaccaatgatgag
aaggacgaaggtggaatgtcttccgactcagatcaaccatttactgaacccgagatgcga
gagcgtttcaggagtgttctcaagaagtacttcgacgacgtcaaagggcacatcactcga
gatcaaaagtctattcagtcacaagctcgacgcaatgccgaggcgtacgtcaagtctggc
gaggtttttgaagatcgacaggcaaattatgagaaacaggtcaaggctcaggagcgccta
gtttccaacgcccaagttatcgcagatgccattggggctgatatgcctgacttgaaggat
tcggacgactcactcggcgcattcaatgggtcaattggtctagtcaagaccggcgattac
ttgcgttcgatgggtgacggagctggtatctgggaggacgaagacgagcgccgcttctac
gaaaacttggtcgaccttaaaggcaaggttccgcctattctgctcgaagacggcaagaag
aaaaagaccgacacggatgaacaagttggcaagaagattgatcctgccgaggccgctgag
gctgccaaacctgctgatagtgctgatgatcagtcaacggcaatcgccaaccgaaccatt
ggtgcccaggttgatgctctccttgctcgcctgccagagctgaccaacaaggacgttgtc
gaccagacagcgattgacttttgcttcctcaattccaaggcttcacgcaaccgtcttgtc
aaggctttgaccgaggttcccaagggtcggagtgatttgcttccatcatggtctcgtctt
gttgctacacttggacggtacatgccagatgttcccaagggccttgtggactatctcgat
gcagaattccgaagtctacaaaggcgaaaggagaaggacttcttgggccaggttcgactg
agcaacattcgatatctcgccgagctgaccaagtttggcatcgtccctgaacacgtcgtc
tttcactgcttgaaggtgagtctcgatgatttctcgcgcatgaacattgagattctgtgc
aatctcattgagaactgcggtcgatatcttcttcgcaaccccgagacggctccccgtatg
gtgagcttcctcgagactctccagcgcaagaagtctgttcagcacattggacagcctgag
cgtatgcttatcgacaacgccgtctactatgtcgacccgcctgagaggccggctattgaa
cagaaggaacggacaccaatggaactctttgttcgcaaattgatctatgttgatatgacc
aagagaaattacagcaagattttgaagcaaatcaggagactccactgggaagagacagag
gttgttgccattttagaaaaggtcttctcaaagcctggcaaggtcaaatatggcagtgtc
catctccttggaattctgctgagcgccctctatcgctatcatcctgcatttgttgtcaag
gtcatcgacaacgtcattgagtccgtaacctttgggttggagcagaatgactacagattc
tatcagcgacgcatagcggaagtcaagtatcttggcgagctctacaattaccgcatgctt
gagcacccagtcatcttcgacaccatgtacaagatcatgacattcggatatggtggtccg
cccatccctggcaagttcaacccgcttgatcctccggatgacttcttccgcattcgcctt
gtcgcaactatgctggagacttgcggaatgttcttcaaccgaggtgcagcaggcaagaag
ctggactacttcctctctttcttccagtattacatcttcacaaaggggcctctgcctatg
gacatcgagttcttagtgcaagacacgtttcatctcacccgtccacaatggaagctcgct
gctaatttggatgaagccgtcaaggcgtttcaacttgctgtcgcccaagatcagaagtcg
gctggccttgacaagacagccgatatggatgacgccactagtgatccttcgtccgatgat
gacaacggcgacaacgatgatgtggatggtgatgacaacgacgatagcgcctccgaagag
gaggatgcagatgacgttgaagaggagtctgacagcgagagcacttttgaggaagaagct
attgttgtcactcgacaggaagaggaagttgaccctgaagacgaggctgactttgaacgt
gagtatgccaagctgatggccgagagtctggagtcgcgcaagtttgagcgcaaacagctc
ttcgacgtgccactcccagtccgagccaagaatcgtgaagcaccatcctcagcagaaggg
gccagcaatgaagcccctcccaaccacactatggcgttctcgctactcaccaagaaaggc
aaccgtcagcagacacgaaccgtcgagctgccatcggactcgacttttgcaatcgctatg
aagaaccagcagcaggctgaacgggaggaacagcagcgcatcaagaacctggtgctcaac
tatgatcttcagcagaacgaagatccggatggtggcaacgaacggccggcgacgtactat
cacaaccgtctggaaaggtcgaacaaggaccgcgggcaaaggtccaggaaactccagctc
agcgatgtcgattggtag
DBGET
integrated database retrieval system
