Fusarium vanettenii: NECHADRAFT_52708
Help
Entry
NECHADRAFT_52708 CDS
T01612
Name
(RefSeq) polysaccharide lyase family 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nhe
Fusarium vanettenii
Pathway
nhe00040
Pentose and glucuronate interconversions
nhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NECHADRAFT_52708
Enzymes [BR:
nhe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
NECHADRAFT_52708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9674417
NCBI-ProteinID:
XP_003042081
JGI:
52708
UniProt:
C7ZHZ8
LinkDB
All DBs
Position
11
AA seq
344 aa
AA seq
DB search
MNLKLFLFYFFAGLAFAFPSDYLKLATWGLEGYAKDNPIGPTTGGKGGKTVFVSTAEQLV
AAVAGTDPKIVRVKGKITLPARLKVGSNTSLIGVGASAHITGKGVDVFNGDNVILQNLKI
SHILDNDCITIRNSTRVWVDHNEFFSDISYGPDHYDGQVDIIRASDFVTVSWNYFHDHWK
SSLVGNDATFRDLDSGHLHITYHHNYWRNMGTRGPAARFGRLHGKFSFHDFYNNLYEDFL
YQAIHSRSDNQVLVEGNVFRGNTSEALSTYGLVIPMDSPNTCTCGDEELDGYANLGAKND
WGSAGVNITQKGTFYKADYKYKLTPLKLVPTVNKLGAGVGRIFK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaaattgtttctcttttacttctttgcgggcctggccttcgcgttcccttca
gactacctcaagttggctacttggggacttgaaggatatgccaaagacaatcccatcggt
cctaccacgggaggcaaaggtggcaagacagtctttgtgtctaccgctgaacagctcgtt
gctgccgttgctggcacagatcccaagatcgtgagggtcaagggcaagatcactctgcct
gcgcgtctcaaggtcggatccaacacgtcccttattggcgtcggcgcctctgcccatatc
acaggaaagggcgtggatgtttttaacggcgacaatgtcattcttcagaacctcaagatc
agccatatcctcgacaatgattgcatcaccatccggaacagcacccgtgtttgggttgac
cacaatgagttcttctctgacatcagctacggacctgaccactatgacggacaagtcgac
attattcgggcctcagactttgtcacagtgtcatggaactacttccacgatcactggaag
tcctccctcgtaggcaacgacgcgaccttccgagacctcgactccggccacctccacatc
acatatcaccacaactattggcgaaatatgggcactagaggtcctgccgcgcgctttggc
cgcttgcatggcaagttctcattccatgatttctacaataacctctacgaagacttcttg
taccaagctatccacagccggtccgacaatcaggttctcgttgagggcaatgtcttccgg
ggcaacacaagcgaagctctgagcacatacggtcttgtgattcccatggattccccaaac
acctgcacttgcggtgacgaggagctcgacggatacgccaaccttggagctaaaaacgac
tggggctcagctggcgtcaacatcacgcagaagggtaccttttacaaggccgattataaa
tacaagctgactcccctcaagcttgttccaactgtgaacaagcttggggctggcgttggc
aggatcttcaagtga
DBGET
integrated database retrieval system
