Fusarium vanettenii: NECHADRAFT_59475
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Entry
NECHADRAFT_59475 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
nhe
Fusarium vanettenii
Pathway
nhe03018
RNA degradation
nhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NECHADRAFT_59475
09123 Folding, sorting and degradation
03018 RNA degradation
NECHADRAFT_59475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_59475
03041 Spliceosome [BR:
nhe03041
]
NECHADRAFT_59475
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NECHADRAFT_59475
mRNA degradation factors
5'-3' decay
Lsm complex
NECHADRAFT_59475
Spliceosome [BR:
nhe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
NECHADRAFT_59475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
9671351
NCBI-ProteinID:
XP_003053324
JGI:
59475
UniProt:
C7YNE3
LinkDB
All DBs
Position
3
AA seq
133 aa
AA seq
DB search
MSDRPSHRGGRGGQGSHPRGGRGGGRGGGGAGAGAHDRERTKKENILDLAKYMDKQITVK
FNGGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNESTRSLGLVVVRGTLLVLVSPVDGS
EEIANPFVQAEDE
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagaccctcgcaccgaggcggccggggcggtcagggatctcacccccgtggc
gggcgaggaggcggaagaggaggaggcggcgctggagcgggtgcccacgatcgcgagagg
accaagaaggagaacattctcgacctggccaagtacatggacaagcagatcactgtcaag
tttaacggcggacgagaggtcaagggcactttgaagggttacgatgctttgatgaacctg
gttctggatgatgtacacgaagttgtccgagacgacgaaggcaacgagtccacccgctcc
ctcggtctcgtcgtcgttcgaggcaccctcctcgtcctcgtgagccccgtcgacggcagc
gaagagatcgccaacccctttgtccaagccgaggatgaatga
DBGET
integrated database retrieval system