KEGG   Fusarium vanettenii: NECHADRAFT_59475
Entry
NECHADRAFT_59475  CDS       T01612                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
nhe  Fusarium vanettenii
Pathway
nhe03018  RNA degradation
nhe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nhe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NECHADRAFT_59475
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NECHADRAFT_59475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nhe03019]
    NECHADRAFT_59475
   03041 Spliceosome [BR:nhe03041]
    NECHADRAFT_59475
Messenger RNA biogenesis [BR:nhe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NECHADRAFT_59475
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     NECHADRAFT_59475
Spliceosome [BR:nhe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    NECHADRAFT_59475
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 9671351
NCBI-ProteinID: XP_003053324
JGI: 59475
UniProt: C7YNE3
LinkDB
Position
3
AA seq 133 aa
MSDRPSHRGGRGGQGSHPRGGRGGGRGGGGAGAGAHDRERTKKENILDLAKYMDKQITVK
FNGGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNESTRSLGLVVVRGTLLVLVSPVDGS
EEIANPFVQAEDE
NT seq 402 nt   +upstreamnt  +downstreamnt
atgtccgatagaccctcgcaccgaggcggccggggcggtcagggatctcacccccgtggc
gggcgaggaggcggaagaggaggaggcggcgctggagcgggtgcccacgatcgcgagagg
accaagaaggagaacattctcgacctggccaagtacatggacaagcagatcactgtcaag
tttaacggcggacgagaggtcaagggcactttgaagggttacgatgctttgatgaacctg
gttctggatgatgtacacgaagttgtccgagacgacgaaggcaacgagtccacccgctcc
ctcggtctcgtcgtcgttcgaggcaccctcctcgtcctcgtgagccccgtcgacggcagc
gaagagatcgccaacccctttgtccaagccgaggatgaatga

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