Fusarium vanettenii: NECHADRAFT_59977
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Entry
NECHADRAFT_59977 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
nhe
Fusarium vanettenii
Pathway
nhe03030
DNA replication
nhe03410
Base excision repair
nhe03420
Nucleotide excision repair
nhe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NECHADRAFT_59977
03410 Base excision repair
NECHADRAFT_59977
03420 Nucleotide excision repair
NECHADRAFT_59977
03430 Mismatch repair
NECHADRAFT_59977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhe03032
]
NECHADRAFT_59977
03036 Chromosome and associated proteins [BR:
nhe03036
]
NECHADRAFT_59977
03400 DNA repair and recombination proteins [BR:
nhe03400
]
NECHADRAFT_59977
DNA replication proteins [BR:
nhe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
NECHADRAFT_59977
DNA Replication Termination Factors
ELG1-RFC complex
NECHADRAFT_59977
Chromosome and associated proteins [BR:
nhe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
NECHADRAFT_59977
DNA repair and recombination proteins [BR:
nhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
NECHADRAFT_59977
Check point factors
HRAD17(Rad24)-RFC complex
NECHADRAFT_59977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
AAA_24
AAA_assoc_2
AAA_16
AAA_22
AAA_30
AAA_11
AAA_5
RuvB_N
AAA_3
DUF815
AAA_19
DEAD
AAA_14
MCM
AAA_28
Mg_chelatase
ResIII
HrpB4
AAA_18
SLFN-g3_helicase
AAA_7
IstB_IS21
TAFII28
bpMoxR
DNAX_ATPase_lid
ATPase_2
AAA_25
nSTAND3
RNA_helicase
TniB
Motif
Other DBs
NCBI-GeneID:
9673288
NCBI-ProteinID:
XP_003052060
JGI:
59977
UniProt:
C7YPT4
LinkDB
All DBs
Position
4
AA seq
389 aa
AA seq
DB search
MSDFEDEMDVDVPAPSKDVLFSADTSKGKRSAANLPVEAEDSLPWVEKYRPNTLEDVSGH
HDILATINKFVDTNRLPHLLLYGPPGTGKTSTILALARRIYGAANMRQMVLELNASDDRG
IDVVREQIKTFASTKQIFSLGGASARAGAGFKLIVLDEADAMTSTAQMALRRIMEKYTVN
TRFCIIANYAHKLSPALLSRCTRFRFSPLKEADIRVLVDKVVEEEHVKIGGEAVDALVKL
SKGDMRRALNVLQACHASSTPLRPKDAPKIPDSEIKRDNITTETIYNCIAAPPPDAIKEI
LSTLLNTSDVTSCLTTINSLKVSLGLALADIITALSEELTKLEVSPEVMITWLDGLADIE
HRVAGGSSESIQTGAVVGVVRSGVELMSR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactttgaagatgagatggacgttgatgtccctgcaccttccaaggatgttctc
ttttcagccgacacatcaaaggggaagcggagtgctgctaatctgcctgtagaggctgag
gatagcttgccttgggttgaaaagtaccgcccgaataccctcgaagatgtctcgggtcat
cacgacatcctggccacaatcaacaagtttgtcgataccaaccgcctcccccacctcctc
ctctacggccctccaggcaccggcaagacatccaccatcctcgccctcgcgcgccgcatc
tatggcgccgcaaacatgcgccagatggtgcttgagcttaacgcctcggacgaccgtggt
atcgacgtcgtgcgcgaacaaatcaagacctttgccagtaccaagcagatattctcgctt
gggggagcgtcagcccgcgcgggcgctgggttcaagctcatcgtactggatgaggccgac
gccatgacgagtacagctcagatggctctgcgacgtatcatggaaaagtacaccgtcaac
acacgcttctgcatcatcgccaactacgcccacaagcttagtcctgccctgctgagtcgt
tgcactcgcttccgcttcagccctctcaaggaggccgacatccgggtgctggtagacaag
gtggttgaggaggagcacgtcaagattggcggcgaggcggtggatgcgctggtgaagctg
agcaagggcgacatgcgacgggcattgaacgtgctacaagcttgccatgcgtcaagtacg
ccgttgcgaccgaaggatgctcctaagatccctgatagtgagattaagcgggacaacatc
acaacagaaacaatctacaactgtatcgcagcgccacctccagacgccatcaaggagatt
ctatcgacgctgctcaacacatcagatgtgacaagctgtctgaccaccatcaactctctc
aaagtatcgctaggtctggctctagctgacatcatcaccgctctgtcggaagagcttaca
aagctcgaagtaagcccagaggtgatgatcacctggctggatggtctggccgacatcgag
catagagtggctggtggaagcagcgagtctatccagacgggtgctgttgttggtgttgtc
cgcagcggcgttgagttgatgagccgatga
DBGET
integrated database retrieval system
