Fusarium vanettenii: NECHADRAFT_63963
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Entry
NECHADRAFT_63963 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
nhe
Fusarium vanettenii
Pathway
nhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NECHADRAFT_63963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nhe03041
]
NECHADRAFT_63963
Enzymes [BR:
nhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NECHADRAFT_63963
Spliceosome [BR:
nhe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
NECHADRAFT_63963
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
HA2_C
DEAD
AAA_22
nSTAND_NTPase5
AAA_19
AAA_30
nSTAND3
T2SSE
SRP54
Cas3-like_C_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9677568
NCBI-ProteinID:
XP_003040045
JGI:
63963
UniProt:
C7ZPD8
LinkDB
All DBs
Position
10
AA seq
1006 aa
AA seq
DB search
MSSKKYALLPMDEDEVGPQKVSKEKKHRHRHRDRDEKSSSRNSRPRRDRSRSRSPGRGSS
SHHSRSKQYRRRDDKADFDDRWGDEEPPSSEPEEEEEEFEESASKRVKLSHDEPKEEDLS
DGAKEELDRRKDIEEREAFAKRLKEKDDKRSKHGEREGESSRRKLAEDAEARNKALPDIR
ERSRQEYLKKREAERLALLRKQVAEETAELRSGVRLSEKEKAEFAKNREILRLAEERLKI
DDHRDGYAMPEDYITEKGKLDRKKKEEALYKRYVEKDEYGQEKFVTEHEEWEREQASKAK
AQIQRAERENEDYDYVMDEEQYIQWNLDSRMEGDDQKMTKEQQFLAAQIDAAEKKALTIQ
ETRKSLPIYQYRDEFLAALEQYQVLVIVGETGSGKTTQLPQYLHEAGYTKNGMKVGCTQP
RRVAAMSVAARVADEVGVKVGNEVGYTIRFEDCTSDKTVLKYMTDGMLLREFMTEPDLGG
YSALMIDEAHERTVHTDILLALVKDLSRERPDLKLLISSATMNAEKFAQYFDDAPIFNIP
GRRYPVDIYYTPAPEANYLAAAITTTFQIHTTQGKGDILIFLTGQDEIEAAEQEIAETAK
KLGSRIKELVICPIYANLPSELQSKIFEPTPDGARKVVLATNIAETSLTIDGIVYVIDPG
YVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKFAYMNEMDESTTP
EIQRTNLNGVVLQLKSLGINELLEFEFMDPPPTEALIGALNQLFALQALNHRGELTKLGR
QMAEFPTDPMLAKAVLAADKEGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRFTV
KDGGDHITLLNVWNQWVDSDFSPVWSKENFLQQRSLTRARDVRDQLAKLCERVEVAPSTC
GASNLRPIKRAITAGFFPNAARLQKSGDSYRTVKNNTTVWIHPSSVLMAIDPPEKMVVYF
ELVQTTKEYMRSVMPIEPRWLSELAPHFHKKKDIEAMEEKKMPKQR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaaaaagtacgctctcctccctatggatgaggatgaggtcggccctcaaaaa
gtttccaaggagaagaagcacaggcatcgacatcgcgaccgagacgagaaatcctcatcc
cgaaattctaggccacgtcgcgatcgcagtcgctcgaggtctccgggccgagggtcttca
tcacaccacagccgatctaagcagtaccgaagacgcgatgacaaggccgactttgacgat
cgatggggagatgaggagccaccttcctccgagcctgaggaggaggaggaagaatttgag
gagtcggctagcaagagggttaagctgagccatgatgagccaaaggaggaggacctttca
gacggcgcaaaggaggagttggatcggagaaaggacattgaagagcgcgaagcctttgcg
aagcgactgaaggaaaaggacgacaagagatcgaaacacggcgaaagagagggagaatca
tcgaggagaaaactcgcagaggatgctgaggcacgaaacaaggcgctccccgatatccga
gaacgatcgcgacaggaatacctcaagaagcgagaggcagaacgtcttgctcttctacgg
aagcaggtcgccgaagagacggctgagttgaggagcggcgtgcgactgtcggagaaggaa
aaggccgagtttgccaagaacagggagatcctacgcctggcggaggaacgcctcaagatt
gacgaccaccgcgatggatatgcgatgccggaggattacatcacagaaaagggaaaactg
gaccgcaagaagaaagaggaggcactctacaagagatacgttgaaaaggacgaatatggc
caggagaaattcgtcaccgagcatgaggagtgggagcgagagcaggcctcgaaggccaag
gcgcagattcaacgcgccgagagagaaaatgaggactacgactatgtgatggacgaggaa
cagtacatccaatggaatttggactcacggatggagggcgatgaccaaaagatgaccaag
gagcagcagttcttggcggcacaaatcgacgcagcggagaagaaggctttgaccatccag
gagacgagaaagagtttacccatttaccagtatcgcgacgaatttctggcggcgttggag
cagtatcaggttttggtcattgttggagagactggtagtggaaagacaacacaactaccg
cagtatcttcacgaagcgggatacaccaagaacggcatgaaggtgggatgcacacaaccc
cgacgagtggcagccatgagtgtagcagctcgtgttgcagacgaagtcggtgtcaaggtc
ggcaacgaagttggatacacgattcgtttcgaggattgcaccagcgacaagaccgttttg
aagtacatgaccgatggtatgcttcttcgagagttcatgacggagcctgacctgggagga
tattctgcactgatgatcgacgaggcgcacgaacggacggttcacactgatatcctgctg
gcgctggtcaaggatctgtctcgagagcggcctgaccttaagcttctgatctcttcggct
accatgaacgccgagaagtttgcgcagtactttgacgacgcgcccatctttaatattccc
ggtcgacgatatcctgtggacatttactatacacctgcccctgaggccaactatctggct
gccgcaattacgacaacgttccagattcataccacacaaggcaagggtgacatcttgatc
ttcctgacgggtcaagatgagattgaagcggctgagcaagagattgcggaaacggcaaag
aaacttggaagtcgcatcaaggaacttgtcatttgtcccatctacgccaacctaccatca
gaacttcagtcaaagatctttgagccgactccagatggagctcgcaaggttgtcttggct
accaacattgccgagaccagtttaaccattgatggtatcgtctatgtcattgaccccggc
tacgtcaaggagaacgtctataaccctgcaaccggcatgtcgaacctggttgttgtacct
tgctcgcgagcctctgccaatcagcggagcggtcgagctggacgtgtcggacctggaaag
tgcttcaggttgtacaccaagtttgcgtacatgaacgaaatggacgagtcaacgactcct
gagattcagcgaaccaacctgaacggtgttgtgcttcagctgaagtcgctgggcatcaac
gagctgctagagtttgagttcatggaccctccgcccacggaagctctcatcggcgctttg
aaccagctgtttgcgctgcaggctttgaatcatcgtggagagttgaccaagctaggtcgt
caaatggccgaattccctaccgatcccatgctcgccaaggctgtactggctgcagacaag
gagggatgcgtagaggaggttctgtccatcgtttcgatgcttggtgaggcttcagctctc
ttcttccgacccaaggataagaagattcacgcagacagcgcccgcaaccggtttacggtt
aaggatggaggtgaccatatcacccttctcaacgtgtggaatcaatgggtggacagtgat
ttctcccctgtctggtcaaaggagaactttttgcagcaacggtccttgacccgagcgcgc
gatgtccgtgatcaactggccaagctctgcgaacgtgtcgaagttgccccctctacttgc
ggagcgtccaacctccgacccatcaagagagccatcacggctggtttcttccccaacgcg
gcgcgactacagaagagcggtgacagttacaggacggtcaagaacaacacgacagtgtgg
attcacccaagtagcgtgttgatggccatcgatccgcccgagaagatggtggtgtatttt
gagcttgtgcagactacgaaggagtacatgcgtagtgtgatgccgatcgagcccaggtgg
ctttcggagttggcaccgcattttcataagaagaaggatattgaagctatggaggaaaag
aaaatgcccaagcagcggtag
DBGET
integrated database retrieval system
