KEGG   Fusarium vanettenii: NECHADRAFT_74548
Entry
NECHADRAFT_74548  CDS       T01612                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
nhe  Fusarium vanettenii
Pathway
nhe03020  RNA polymerase
nhe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nhe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NECHADRAFT_74548
  09124 Replication and repair
   03420 Nucleotide excision repair
    NECHADRAFT_74548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nhe03021]
    NECHADRAFT_74548
   03019 Messenger RNA biogenesis [BR:nhe03019]
    NECHADRAFT_74548
   03400 DNA repair and recombination proteins [BR:nhe03400]
    NECHADRAFT_74548
Transcription machinery [BR:nhe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     NECHADRAFT_74548
Messenger RNA biogenesis [BR:nhe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NECHADRAFT_74548
DNA repair and recombination proteins [BR:nhe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NECHADRAFT_74548
SSDB
Motif
Pfam: SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 9664142
NCBI-ProteinID: XP_003054136
JGI: 74548
UniProt: C7YKB3
LinkDB
Position
1
AA seq 147 aa
MFFLYNLERRVTLHPSFFGRNMHDLVTHKLLTDVEGTCAGSYFIISIMDTFDISEGRILP
GNGLAEFTVGYRAVVWRPFKGETLIPSDIKWDPNATPPQFTNNEDTVIEPDTHVRVKIIG
TRTEVGEMWAIGSIKEDYLGMIEASAG
NT seq 444 nt   +upstreamnt  +downstreamnt
atgttctttctctacaatctggaacgtagggtcaccctgcacccatcgttctttggtcgc
aacatgcacgatctcgtgacacacaagctcctgaccgacgtcgagggcacatgcgccggc
agctacttcatcatttccatcatggacacctttgacatctccgagggacgtattctccct
ggaaacggcctcgcagagttcacagttggctatcgcgccgtcgtatggcgacccttcaag
ggcgagacgttgatccccagcgacatcaagtgggatcccaacgcgacaccaccccaattc
accaacaatgaggacacagtcattgagcccgatacccacgttcgcgtaaaaatcattggt
accagaaccgaggtcggagagatgtgggctattggcagcatcaaggaggactacttgggg
atgattgaagcttctgctggctag

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