Fusarium vanettenii: NECHADRAFT_76709
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Entry
NECHADRAFT_76709 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
nhe
Fusarium vanettenii
Pathway
nhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NECHADRAFT_76709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nhe03041
]
NECHADRAFT_76709
03009 Ribosome biogenesis [BR:
nhe03009
]
NECHADRAFT_76709
Enzymes [BR:
nhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NECHADRAFT_76709
Spliceosome [BR:
nhe03041
]
Complex A
U2 snRNP components
U2 related factors
NECHADRAFT_76709
Complex B
NECHADRAFT_76709
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
NECHADRAFT_76709
Ribosome biogenesis [BR:
nhe03009
]
Eukaryotic type
90S particles
Helicases
NECHADRAFT_76709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
AAA_22
DEAD
Motif
Other DBs
NCBI-GeneID:
9678258
NCBI-ProteinID:
XP_003046152
JGI:
76709
UniProt:
C7Z511
LinkDB
All DBs
Position
2
AA seq
701 aa
AA seq
DB search
MESMLWNRMTAEQAMALEDATKNPFLPGSLHSAEYFADLSRRREQYSICRPENRQEFLRC
FQSGRITIVVGDTGCGKITQLVQFILFDEWMHDEKIVGCTQPRGSTASSAAAQVASEMEL
PLGGIVGCYTHSGDWDRSSGDTRLKFLTDSFLLQEFVSRRGFHDYGCIVIDQAHERTLAT
DMLMGLLKDATRARDDLKVVIVLDVDTGLDKFTKFFGTRNVFRVAERANAIQIRYLEEET
PDALTTACSLMIVRSKPRGNILLFLTSDRDVWGACERLGRDVRTLKTLPLSQVPASPDAL
QDDGAQKCFVTTGLAEVSVKIPEITYVIDKGRCRQFRYSPRVGMYTLMTVPIPKPTAQLR
AAQISRNQQGGICYRLYTKQTFNWICPPNNHLAIHASEMTREILMLKSCGYHEISKFNFV
DRPHTETILRALAELRALGFTDSDTNITRKGEIAVCLPTPIDPAWYNAFLEAEKLGCLGE
IVTIACLLSSQEDLFVRPYEQRYSVDVKRQCFGHIDSDHLARLNAFLAYFHRRDICSDEA
ELSNWCQSQGINLEVAEEARLMRGGLMPEVSHGMLYGGPVPTLDPRDPDFSAKIRQSLAV
GFCHKTAILSRRGDDNYKTVHENYPVALEPDSCLIGMGWEWVVYHHIRFARVQYMHCITA
IEPEWIMDHNLARKYDQVTLRNPEVKASLDRARAKTESESV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggagtctatgctgtggaaccgcatgacggccgagcaggccatggcgctcgaagacgcc
accaaaaacccctttctgcccggcagcttgcactctgccgagtactttgcggacctcagc
aggcgccgcgaacaatactcgatttgccgccctgagaaccgtcaggaatttctccggtgc
ttccagtcgggaagaatcaccatcgtcgtcggggatacgggctgcggcaagatcacacag
ctcgtgcagttcatcctttttgatgaatggatgcacgacgaaaagattgttggctgtaca
cagcctcgcggctctactgcatccagcgcagcagctcaggttgccagcgagatggagctt
cctctcggcggcatcgttggatgctacacccatagtggcgattgggatcgcagcagcggt
gacacccgcctgaagttcttgaccgacagcttcttgcttcaggagtttgtatctcgccgc
ggcttccatgactatggatgcattgtcatcgaccaggcacatgagcgaaccctggcgaca
gatatgttgatgggcttgctcaaggatgctaccagggctcgtgatgacttgaaggttgtc
attgtcttggacgtcgataccggcctcgacaagtttaccaagttcttcgggacccgcaac
gtcttccgtgttgccgagcgagctaacgccatccaaatccgatacctggaggaggaaacg
cctgatgccttgactaccgcctgcagccttatgatcgtcaggtctaagcccagagggaac
atcctcttgttcctaacttctgaccgagatgtctggggcgcctgtgagaggctcggccgg
gatgtccgcaccctcaagaccctccccttgtctcaagttcccgcatcgcccgatgcgctt
caggatgacggagcccagaagtgtttcgtcactactggattggctgaggtcagcgtgaag
atccccgagatcacctatgtgatcgacaagggcaggtgcaggcaattcaggtatagcccg
cgtgtagggatgtacactttgatgacggtcccgatccctaagcctacagcacagctacga
gccgcccagatcagtcggaatcagcagggtggcatctgctaccgactttacaccaagcag
accttcaactggatctgcccccccaataaccatctcgcaatccacgccagcgagatgaca
agggagatcttgatgctgaaaagctgtggctatcatgagatctcgaagttcaactttgtc
gaccgccctcacacagagacgattctgcgagctttggctgagctccgcgctttgggcttc
actgatagcgataccaacatcactcgaaagggcgagatagccgtgtgcttgcccacccct
atcgatcctgcctggtataacgcgttccttgaggcggagaagctcgggtgcctgggcgaa
attgtcaccatcgcctgcttacttagttcgcaggaagatttattcgtgaggccctatgag
cagcgatacagtgttgatgtcaagcggcagtgcttcggtcacattgattccgaccacctg
gctcgactcaatgccttccttgcctacttccaccgccgagatatctgttccgacgaagca
gagttgtccaactggtgccagagccagggaatcaacttggaggttgccgaggaggccagg
ctcatgcgaggcggactgatgccagaggtttcgcatggaatgctctatggtggcccagtg
ccgaccctagatccccgggacccggatttcagtgcaaagattcgccaaagcctggcagtt
ggcttctgccacaagaccgcgatcctgagcagaaggggcgatgacaactacaaaacggtt
catgagaattacccagtcgcgcttgaaccagacagctgcctcatcggcatggggtgggag
tgggtggtttaccatcacatccgtttcgctagggtccagtatatgcactgcatcacagcc
attgaacctgaatggattatggatcacaacctggcgcgcaaatacgaccaagttacgctt
aggaaccccgaagtcaaggcctccctcgaccgggccagagccaagactgagtcggagtct
gtctag
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integrated database retrieval system
