Fusarium vanettenii: NECHADRAFT_84055
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Entry
NECHADRAFT_84055 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
nhe
Fusarium vanettenii
Pathway
nhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NECHADRAFT_84055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhe03021
]
NECHADRAFT_84055
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_84055
Transcription machinery [BR:
nhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NECHADRAFT_84055
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
NECHADRAFT_84055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
Pfc11_Clp1_ID
VHS
zf_PCFS4
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
9667605
NCBI-ProteinID:
XP_003048528
JGI:
84055
UniProt:
C7YZK0
LinkDB
All DBs
Position
8
AA seq
663 aa
AA seq
DB search
MTSDSAEVAEDYRLALEDLSSNMRFEISNLTTIARENTEHALAIAEVLQQHILKAPPNKK
LPALYVLDSIVKNVGTPYTLYFGRNLFKTFMESYAVVDQPVRRKMEEMLRTWKEPVRGSM
DSRPVFTHELVRPIENALMKARAASMPQPGMIPGRPRSAIPHRDTPTPPGMRGQPGYPAQ
QYPSNGGQPFPGQQPPYYPPHSTPQPNNSAPAPFQAPYPGAYGVGGTPTPAGISIETLSN
DIQNLIVAMQAEASRNPQDASVQTRLRALLDLQGIVKSTSLPPDQLELIKNKVTELAAVN
MMAPLAQKPTPTPTPPVPVQARPMPPVSVAPSSAPAAAAPGGVTLDSLLGKGALAALMAR
QSATPQNSTPTPQPPAYANVAIRSPPPVHAELPKPAPVPATGSAMSLLDQLRQAGLLPPS
SAPAAPVAPPPAPIVPPNIASLLASSKAAGMLANFNAPPAGGINVAALKQPFHPSLVSRL
HDELGPPCTQCGRRFRTDEEGKKKKTAHMDWHFRVHQRANEAEKRGMHRSWYVDQRDWLK
SREAVDVDHIPGPDEVAAQASKASEAAKPKYIPVPEPSRGINTVCPICQDRFENKWLDTA
QEWVWLDTVLVGNRAYHASCHAEATRDRESTPGLGRTPEPVLGKRKAETSIASPKVRSLK
TSA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacttcggattctgcagaggtcgcggaggattaccgcctcgcgctggaggacctctcc
tccaacatgcgattcgaaatcagcaacttgactactattgctcgcgagaatactgagcat
gcgctggcgattgccgaggttttgcagcagcacatcttgaaggcgcccccgaataagaaa
ttgccagctttatacgtactcgattcgatcgtcaaaaatgtcggaacgccctatactctc
tacttcggtcgcaacctcttcaaaacattcatggaatcatatgcggtagtcgaccaacct
gttcgccgcaagatggaggagatgcttcggacgtggaaggagccggttcgtggatcaatg
gacagcaggcctgtctttacacacgagctggtgcgtcctattgagaatgcgctcatgaag
gcacgagcggcaagtatgcctcagccaggaatgatacctggtcgtccacgttcggcaatt
cctcatcgtgatactcctacacctcctggaatgcgagggcagcccggttatccagctcag
caatacccttcgaacggagggcagcccttcccaggccaacagcccccctattacccccct
cactcaacacctcaacctaacaactctgcccctgcacctttccaagctccctatcccggg
gcgtacggggtcggtgggacgcccacccccgctgggataagcatagaaacattgagcaat
gacattcagaacctgattgtggcgatgcaggcagaagcctcgcggaatcctcaagatgct
agtgttcagaccagactaagagcgctgctggacctccagggcattgtgaagagcactagc
ttgcctccggaccagctcgagctcattaagaacaaagtaactgaacttgctgccgtaaac
atgatggcgccattggcccagaaacctacacctacaccaactcctcccgtacccgtccag
gcacgtccaatgcctccggtgtccgtagccccttcatcagcccccgcggctgcggcaccg
ggaggtgtgacgctcgactctctgttgggcaagggtgcgttggcggccttgatggccagg
cagtcagcaacgcctcagaactcgacaccaacaccacagcctccagcgtatgccaatgtg
gccattcgatcaccacctccagttcatgctgagcttccaaagccggcaccggtaccggca
accgggagtgcgatgagtctcctggatcaacttcgacaagcaggtttgcttccaccgtca
tctgcgccggctgctcctgttgcgccgcccccagcaccgattgtccctccaaacattgca
agcctactggcctcgagcaaggcagctggcatgttggcaaacttcaacgctccgcccgct
ggtggtatcaatgtggccgctttgaagcaaccattccatccttctttagtttcacgtctc
catgacgaacttggacctccttgcacgcagtgtggcagacgattccgaactgatgaagag
ggcaagaagaagaagactgcccatatggactggcatttccgtgtgcatcagcgagccaac
gaggccgagaagcgaggcatgcaccggagttggtatgtcgaccaacgtgactggctgaag
tcgagggaagctgtcgacgtggaccatatccctgggccagacgaggtggcagcacaggct
tcgaaggcgtcagaggccgccaagcccaagtatattcctgtgccagaaccgtcgcgtggg
atcaacaccgtgtgcccgatttgtcaggatcggtttgagaacaagtggcttgacactgcg
caggagtgggtgtggctggacacggtcttggtaggcaaccgggcatatcacgcctcatgt
catgcagaagcaacaagagaccgtgaaagcacacctggtctgggacgaacaccagagccg
gtgcttggaaagcgcaaggcggaaacgagtattgcatcacccaaggtgcgatcgctgaag
acgtcagcttga
DBGET
integrated database retrieval system
