Fusarium vanettenii: NECHADRAFT_89726
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Entry
NECHADRAFT_89726 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
nhe
Fusarium vanettenii
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nhe03041
]
NECHADRAFT_89726
Enzymes [BR:
nhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NECHADRAFT_89726
Spliceosome [BR:
nhe03041
]
Complex C
Other components
Complex C specific factors
NECHADRAFT_89726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
AAA_19
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
9677420
NCBI-ProteinID:
XP_003049845
JGI:
89726
UniProt:
C7YW84
LinkDB
All DBs
Position
1
AA seq
675 aa
AA seq
DB search
MGDLDLDSTFIPALHKPAALLPIAKHRESLLYVVDTHPVSIVIGQTGSGKTTQIPQFLEQ
AGWCSDGKVIGITQPRRVAATTVAVRVAEEVGCEVGKEVGYSIRFEDVTSASTKIKFLTD
GLLIREALVDPLLTRYSVIMVDEAHERSISTDILLGLLKKIRRKRPDLRVIISSATLQAK
EFLDFFTRSSDDQSTKGNGDAKNEIGAIVSLEGRTYPIDILYLESPAENYLEKAIDVVFD
IHTQEGEGDILVFLTGREEIDNAIQAVSERLADLNPKYGPLMALPLYAGLSSEQQMYIFD
KTPEGTRKVVFSTNIAEASVTIDGIVYVVDSGFVKLRAYDPRTGIESLTATPVSKAAASQ
RAGRAGRTKPGKCFRLYTEQGYQSLQEANIPELQRSNLAPVILQLKALGIDNVVRFDFLS
PPPSELMSKALELLYALGALDEYAKLTRPLGSRMAELAVEPMMAKTLLSAQSFGCLSEML
TIAAMTSLGGSVWFSHEGERKKMETSRRKFAVDEGDHLTLLNAYQAFITKGRKEAKFCHE
NNLNYKSMSRAVSIRAQLKRYLERFSINVDETLAGQASVDNIKKAGQIRRCLTSGYFAHA
ARMQPDGTFRNVEGGTVLHAHPSSLMFNRKADWVIFHEAMETGGKIFIREVTKIEKGWLL
EYAPEFYKVTSDRRG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatttagatttggactcaaccttcatcccggcgcttcataagccagctgctctt
cttcccatcgccaaacaccgagaaagtttactctatgtcgtagacacacatccagtctcg
attgtgattggtcagacgggttctggaaagacgacacagatcccacagttcctggaacag
gcaggatggtgttcagacgggaaggtcattggcatcacacagccccgtcgagtcgcggca
acaacagttgcagtgcgtgtggccgaagaagttggctgtgaagttggcaaggaggtcgga
tactctattcgatttgaagatgttacttctgcctccaccaagatcaaatttctcaccgat
ggtctactcattcgggaggccctcgtcgatcctctgttgacgcggtactccgtcataatg
gtagatgaggcacatgaaaggtctatcagcaccgacattctccttggtctactcaaaaag
atccggcgaaaacggccggaccttcgcgtcatcatcagcagtgccaccctgcaggccaag
gagtttctggatttctttacgaggagcagcgatgaccagtccaccaagggaaatggagat
gcgaaaaatgagatcggagctatcgtcagcctggaagggagaacatacccgatagacatc
ctatatctggagtcaccagcggagaattacctggaaaaggccatcgacgtggtcttcgac
atacacacccaagaaggcgaaggagacattttagtcttccttacaggccgagaagaaatc
gacaatgcgatacaggcggtcagtgagcggctggctgacctcaacccaaaatatggtcct
ctgatggctttgccattatatgctggtctctccagcgagcagcagatgtacatattcgac
aaaactcccgaaggcacccggaaagtggtgttctcgacaaacatcgcagaagcctcggtg
accatcgatggtatcgtttacgtggtcgacagcggatttgtgaagctgagagcctatgac
cctaggaccggaatagagtcactcaccgctacgccagtctccaaggcggcggcatcacag
cgtgcaggacgagctggacgaacaaagccgggaaagtgctttcgactttacaccgagcaa
ggttaccagtcactgcaggaggccaatattccagagctccagaggtcaaatctagcccca
gtcatcttgcagctaaaggcattggggatagacaacgttgttcggttcgactttttatca
cccccaccttccgagctgatgtccaaagcactggagctgctctatgctctaggagcactt
gacgaatacgccaaactcacccggcctcttggctcaaggatggctgagctggcggtggaa
cccatgatggccaagaccctcctgtcagcgcaatcctttggctgcctcagcgagatgctg
acaattgcggccatgactagtcttgggggcagcgtgtggttttcgcacgagggcgagagg
aagaagatggaaacatcacggagaaagtttgctgtggatgagggagaccatttaactctc
ctgaacgcgtaccaggcctttatcaccaagggaagaaaggaggccaagttttgtcacgag
aataacctcaactacaagtcgatgagtcgagcggtgagtatcagggcacagctgaaacga
tacctggagaggttcagcatcaatgtcgatgagacgctcgctggacaagcatcggtggac
aatatcaaaaaggcgggacagatccgacgctgcctcacatcaggatactttgcccacgcg
gcgaggatgcagcccgacggaacgtttcgcaacgtcgaaggaggaacagtactgcacgcg
catccaagctccctcatgttcaaccgtaaagcggattgggtcatcttccacgaggcgatg
gagacgggtggcaagatcttcatccgggaagtgaccaagatcgagaaaggttggctgcta
gagtacgcgccagagttctacaaggtgacatcggataggcgggggtaa
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