KEGG   Fusarium vanettenii: NECHADRAFT_90152
Entry
NECHADRAFT_90152  CDS       T01612                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
nhe  Fusarium vanettenii
Pathway
nhe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nhe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NECHADRAFT_90152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nhe03041]
    NECHADRAFT_90152
Spliceosome [BR:nhe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    NECHADRAFT_90152
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 PRP4 Beta-prop_EML WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_HPS5 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_RIG_1st WDR54 Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_DCAF12 Nucleoporin_N Nbas_N
Other DBs
NCBI-GeneID: 9664481
NCBI-ProteinID: XP_003053610
JGI: 90152
UniProt: C7YHD1
LinkDB
Position
1
AA seq 519 aa
MMHPSRQAYVEDAEPNQGIALEDIPDDHDYDLHMGGTGVAPEKASAILNQFNRKRLAATI
AVPTDDGRVRAKLREMGEPMTLFGEGPVDRRDRLRELLTIQAEMDGLESGDITMEDAADE
AQEEQEEEFYSRGGPELLKARIKLAEYSLPRAKKRVQFQKAESTIPLRTHVKFRKQIKER
LQAFELQGSQTVGERHVSMTRISPNGEMVAVGNWGGQVKLVEIPTLKEKMTFRGHTNKIS
GLSWFPGATLPENNISPDTVNLASGGAEGLVHLWSLNQDTPLSTLQGHSQRVCRIEFHPS
GRYLASASEDTSWRLWDVETTAEVLLQEGHSRGVYAVSFNTDGSLLASAGLDSIGRIWDL
RTGRTIMILDGHLDGHIKPIHALDWSSDGHRVLTGSADGWIKCWDVRKVQRTGGIGAHTS
AVSDMRWYKGLDDPLDGIPPGVDDKGAQLPKKSSTFFVSSGFDKNVKIFSADDWTLVQTL
SGHTGPVASVDYSRDGKWIVSGGHDRTVKLWGRNDGEGI
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgatgcatccatcgcggcaggcgtatgtggaggacgccgaaccgaaccaaggcatcgcc
ttggaggatatccccgatgatcacgactacgaccttcacatgggagggaccggtgtcgcg
cccgaaaaagcctctgccattctaaaccagttcaatcgaaagcgactcgccgccacgatc
gctgtaccaaccgacgatggacgagttcgcgcaaagctcagagaaatgggggagcccatg
actctctttggagagggacccgtcgaccgccgagatcgattgcgcgagcttctcacgatc
caggccgagatggatggcttggagagtggtgacatcaccatggaggacgccgcagacgaa
gcgcaagaggaacaggaggaagaattctattcaagaggtggcccagagcttctcaaggcc
cgaatcaagttggccgagtactctctgccccgagcaaagaagagagtccagttccaaaaa
gccgagtcgactatacccctgcgcacccacgtcaagtttcgaaaacagatcaaggaaagg
ttgcaagcttttgagcttcagggcagtcagacggttggagaacgacacgtcagtatgaca
aggatatcaccaaacggagagatggttgctgtgggcaactggggcggacaggtcaagttg
gttgagataccaactttgaaagaaaagatgaccttccgtggtcataccaacaaaatcagc
ggcctatcttggttcccgggtgcgacccttccagaaaacaacatttctcccgacacagtc
aacctggcatcaggcggtgctgagggcctcgttcacctctggtcactgaaccaggacacg
cccctgtcaactcttcagggccattcgcagcgagtttgtcgcatcgagttccatccttcc
ggacgttatctagcttccgcatctgaggatacttcgtggaggctttgggacgtggagact
acggccgaggtcctcctgcaggagggtcactcgaggggtgtttatgctgtcagtttcaac
acggatggatcgctactggcaagcgccggtctggacagcattgggagaatctgggatctg
cgaaccgggcgcacgatcatgattctggatggtcacctcgatggtcacatcaaacctatt
cacgctctagactggagctccgacgggcaccgggttttgacaggatccgctgatggctgg
atcaagtgctgggacgtccgaaaggtgcagcggactggcggaattggtgcgcacaccagc
gctgtgtctgatatgcgctggtacaagggccttgatgatccgttggacggaataccccct
ggtgttgatgacaagggtgctcagctccccaaaaagtcaagcacattctttgtttcgagt
ggtttcgacaaaaatgtcaaaatcttctcggctgatgactggacattggtgcagacgctc
agcggacatacgggaccggttgccagtgtagattacagcagggacggcaaatggattgtt
agcggtgggcatgaccgcacggtcaagctctggggccgcaacgatggtgagggcatctaa

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