Fusarium vanettenii: NECHADRAFT_90152
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Entry
NECHADRAFT_90152 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
nhe
Fusarium vanettenii
Pathway
nhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NECHADRAFT_90152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nhe03041
]
NECHADRAFT_90152
Spliceosome [BR:
nhe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
NECHADRAFT_90152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_HPS5
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_RIG_1st
WDR54
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_DCAF12
Nucleoporin_N
Nbas_N
Motif
Other DBs
NCBI-GeneID:
9664481
NCBI-ProteinID:
XP_003053610
JGI:
90152
UniProt:
C7YHD1
LinkDB
All DBs
Position
1
AA seq
519 aa
AA seq
DB search
MMHPSRQAYVEDAEPNQGIALEDIPDDHDYDLHMGGTGVAPEKASAILNQFNRKRLAATI
AVPTDDGRVRAKLREMGEPMTLFGEGPVDRRDRLRELLTIQAEMDGLESGDITMEDAADE
AQEEQEEEFYSRGGPELLKARIKLAEYSLPRAKKRVQFQKAESTIPLRTHVKFRKQIKER
LQAFELQGSQTVGERHVSMTRISPNGEMVAVGNWGGQVKLVEIPTLKEKMTFRGHTNKIS
GLSWFPGATLPENNISPDTVNLASGGAEGLVHLWSLNQDTPLSTLQGHSQRVCRIEFHPS
GRYLASASEDTSWRLWDVETTAEVLLQEGHSRGVYAVSFNTDGSLLASAGLDSIGRIWDL
RTGRTIMILDGHLDGHIKPIHALDWSSDGHRVLTGSADGWIKCWDVRKVQRTGGIGAHTS
AVSDMRWYKGLDDPLDGIPPGVDDKGAQLPKKSSTFFVSSGFDKNVKIFSADDWTLVQTL
SGHTGPVASVDYSRDGKWIVSGGHDRTVKLWGRNDGEGI
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatccatcgcggcaggcgtatgtggaggacgccgaaccgaaccaaggcatcgcc
ttggaggatatccccgatgatcacgactacgaccttcacatgggagggaccggtgtcgcg
cccgaaaaagcctctgccattctaaaccagttcaatcgaaagcgactcgccgccacgatc
gctgtaccaaccgacgatggacgagttcgcgcaaagctcagagaaatgggggagcccatg
actctctttggagagggacccgtcgaccgccgagatcgattgcgcgagcttctcacgatc
caggccgagatggatggcttggagagtggtgacatcaccatggaggacgccgcagacgaa
gcgcaagaggaacaggaggaagaattctattcaagaggtggcccagagcttctcaaggcc
cgaatcaagttggccgagtactctctgccccgagcaaagaagagagtccagttccaaaaa
gccgagtcgactatacccctgcgcacccacgtcaagtttcgaaaacagatcaaggaaagg
ttgcaagcttttgagcttcagggcagtcagacggttggagaacgacacgtcagtatgaca
aggatatcaccaaacggagagatggttgctgtgggcaactggggcggacaggtcaagttg
gttgagataccaactttgaaagaaaagatgaccttccgtggtcataccaacaaaatcagc
ggcctatcttggttcccgggtgcgacccttccagaaaacaacatttctcccgacacagtc
aacctggcatcaggcggtgctgagggcctcgttcacctctggtcactgaaccaggacacg
cccctgtcaactcttcagggccattcgcagcgagtttgtcgcatcgagttccatccttcc
ggacgttatctagcttccgcatctgaggatacttcgtggaggctttgggacgtggagact
acggccgaggtcctcctgcaggagggtcactcgaggggtgtttatgctgtcagtttcaac
acggatggatcgctactggcaagcgccggtctggacagcattgggagaatctgggatctg
cgaaccgggcgcacgatcatgattctggatggtcacctcgatggtcacatcaaacctatt
cacgctctagactggagctccgacgggcaccgggttttgacaggatccgctgatggctgg
atcaagtgctgggacgtccgaaaggtgcagcggactggcggaattggtgcgcacaccagc
gctgtgtctgatatgcgctggtacaagggccttgatgatccgttggacggaataccccct
ggtgttgatgacaagggtgctcagctccccaaaaagtcaagcacattctttgtttcgagt
ggtttcgacaaaaatgtcaaaatcttctcggctgatgactggacattggtgcagacgctc
agcggacatacgggaccggttgccagtgtagattacagcagggacggcaaatggattgtt
agcggtgggcatgaccgcacggtcaagctctggggccgcaacgatggtgagggcatctaa
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integrated database retrieval system