Fusarium vanettenii: NECHADRAFT_92572
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Entry
NECHADRAFT_92572 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
nhe
Fusarium vanettenii
Pathway
nhe03022
Basal transcription factors
nhe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NECHADRAFT_92572
09124 Replication and repair
03420 Nucleotide excision repair
NECHADRAFT_92572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhe03021
]
NECHADRAFT_92572
03400 DNA repair and recombination proteins [BR:
nhe03400
]
NECHADRAFT_92572
Transcription machinery [BR:
nhe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NECHADRAFT_92572
DNA repair and recombination proteins [BR:
nhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NECHADRAFT_92572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
9668761
NCBI-ProteinID:
XP_003052050
JGI:
92572
UniProt:
C7YPR2
LinkDB
All DBs
Position
4
AA seq
469 aa
AA seq
DB search
MADSDGEYVADDMSDDDIMDHRVTDEDPKGAGGKSSRPHKKDRNATRAWEKSKRTWETNL
PEEDQDGLLSLTALEAEKRKRLLRDTTPLQRGIIRHLVLVLDMSFAMAEKDLLPTRYRLT
LRYAAAFVREFFEQNPISQLGIIGMRDGVAVRISDVGGNPAEHLERLKGLEDQDPQGNPS
LQNALEMCRGALFHAPSHGTREVLIIYGALLSSDPGDIHETVGNLITDRIRVSIVGLSAQ
VAICADLCSRTNAGDESQYNVAMDEVHFRELFLAATTPPVTRTAEQSTASLLMMGFPSRT
LVAGGDTSYCACHNRPFREGYLCTRCSARVCRLPAECPACGLTLILSTHLARSYHHLFPL
RNWVEVPWANAARSAACFSCQAPFPEPPKTKAPDKPKEDAGPKPAKGVSESGRYACEVCR
QHFCIDCDVFAHEVIHNCPGCQSIVQKTDGPVSAEPNGTAHTNGDVVMT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctgactccgatggcgagtacgtcgccgacgacatgtcggacgacgacatcatggac
caccgcgtcaccgatgaagaccctaaaggcgccgggggaaagtcttcgcgaccgcataag
aaggatcgcaacgcgacccgggcctgggaaaagtcgaagcgcacctgggagacgaacctc
cccgaggaagaccaggacgggttattgagtctcacggcgctcgaggctgagaagcgcaag
cgcctgctccgcgacacgacgccgctgcagagaggcatcatccggcacctggtactcgtg
ctcgacatgtcattcgccatggcggaaaaggatctgctgcctacgcggtaccgcctcacg
ctgagatacgctgctgcctttgtccgcgagttctttgagcagaaccctatatctcagctt
ggaatcattggcatgcgcgacggtgttgcggtgaggattagtgatgttggagggaacccg
gctgagcacctggagcggttgaagggtttggaggatcaggaccctcagggcaacccgagt
ctgcagaacgctctcgagatgtgccggggagctttattccacgcaccatcacacggcact
cgagaagtgcttatcatctacggtgctctgctatcgagcgacccgggcgacattcacgag
acggttggcaacctcattacggaccggatacgcgtgtccatcgtcggactatcagcacag
gtggctatctgcgctgacctctgctcgagaacaaatgccggcgacgagtcgcagtataat
gtggccatggacgaagtgcacttccgtgagctcttcctcgccgccaccacgccccccgtc
acccggactgctgagcagagcacggcgagcttactcatgatgggcttcccatcccgtaca
ctcgtggccggcggcgatacaagctactgcgcctgccataaccggcccttccgcgagggt
tacctatgcacacgctgttccgcccgcgtctgtcgcctccccgccgagtgtcctgcctgc
gggctcaccttgattctctccacccatctcgcccgctcttaccaccatctattccctcta
cggaactgggtcgaggtcccttgggctaacgccgcccgctctgcagcgtgcttctcctgc
caggcgccatttcctgaaccgccaaagacaaaggcccctgataagcctaaggaggacgcg
gggcccaaaccggcaaagggcgtcagcgagagcggccgctacgcgtgtgaggtatgccgg
cagcacttttgcatcgactgcgacgtgtttgcccacgaagtcatccacaactgtccgggc
tgtcagagcatagtccagaagacggatggtcccgtttcggctgagccgaacggtacggcg
cacaccaacggcgatgtagtcatgacatag
DBGET
integrated database retrieval system
