Candidatus Nanohalovita haloferacivicina: HBNXNv_0297
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Entry
HBNXNv_0297 CDS
T10381
Name
(GenBank) Archaeal DNA helicase HerA
Organism
nhf Candidatus Nanohalovita haloferacivicina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HerA_C
ResIII
AAA_10
TrwB_AAD_bind
DEAD
FtsK_SpoIIIE
Zeta_toxin
nSTAND3
AAA_22
CbiA
AAA_16
P-loop_TraG
WxLIP_HBD
DUF7507
Sigma54_activat
TRAP_beta
Occludin_ELL
Motif
Other DBs
NCBI-ProteinID:
WEL23154
LinkDB
All DBs
Position
complement(254413..256299)
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AA seq
628 aa
AA seq
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MKKTAIILLALSMMTATAAADISVNDDIPSLSVIFKSEPQIYTLSVTNNGNTTEDVTVTS
RSDLRRVLDLNEQFSLSPGQTRNVKAVMNTTNDLEEGLYLGSLLIQTENTEKSLPVGARV
VTRRNAEFKIDMQATIEEIRPNENIRVLTVLSSSTQGNISAEVTYDVREAQTGRKVFETT
RNTSFVRLKSYRHTIEPNESLSTGDYYIQGHATRGNRTITATDTFQVTNPFWTATRIKLA
ILLLAGGLIIGGGFYTRRWYQEHMQEEARYVFPVDYSKLPDEGDGDQMFEVGKIAETEKS
AYINPKDLTTHAIVAGSTGSGKSVTANIIAEEALEQDIPVVVFDPTAQWTGFVKELKDDN
LLEHYDRFDMNKDTDPHPYPGVIKEIKSEDPDIDFEELRNPGEITVFTLNQLTTEQFDKA
VRKIIDQIFEKEWEESPTLELFIVFDEVHRLLEEYGGEGGYKALEKGAREFRKWGIGLMM
CSQVTADFKQAISGNIMTEVQMQTKSMEDIKRIEKKYGEQFSKRISSEDVGTGMIQNSNY
NDGDPWFVDFRPTYHNPHKIPDEELDQYHELTEEMDKVKDKVQELEDQGQDMQDKQLEIN
LADNKLKEGRFKMARMYIESLKDELDIS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacagcaatcatcctactggcactcagcatgatgaccgcaacagcagctgca
gatatatcagtcaacgacgacatcccctctctcagcgtgatcttcaaatcagaaccacag
atctacacactgagcgtcaccaacaacggaaacacaacagaagacgtaacagtaacaagc
cgatcagacctgcgacgagtgttggatctcaacgaacaatttagcctgagcccaggacaa
accagaaacgtaaaagcagtaatgaacaccaccaacgacctggaagaaggcctataccta
ggaagcctgctgatacaaaccgaaaacaccgaaaaaagccttccagtaggcgcaagagta
gtaacaagaagaaacgccgaattcaaaatcgacatgcaggcaacaatagaagaaatacgg
ccaaacgaaaacataagagtactcacagtactatccagcagcacacagggcaacatctcc
gcagaagtaacatacgacgtaagagaggcccaaacaggaagaaaagtatttgaaacaacc
agaaacaccagctttgtcagactgaaatcgtacagacacactatagaacctaatgaaagc
ctgtcgacaggagactactacatacagggtcacgcaacacgcggaaaccgtacaataaca
gcaacagacactttccaggtaaccaacccattctggacagccacaagaatcaaactagcc
atactacttctggcaggaggcctgatcataggaggaggattctacacacgcagatggtac
caggaacacatgcaggaagaagcaagatacgtattccccgtcgactacagcaaactacca
gatgaaggcgacggagaccagatgtttgaagtaggaaaaatcgcagaaacagagaaatca
gcatacatcaatccaaaagacctcaccacacacgcaatcgtagcaggatccacaggatcc
ggaaaatccgtgaccgccaacatcatcgcagaagaggccctagaacaggacatacctgtc
gtagtattcgatccaacagcacaatggacaggattcgtaaaagaactgaaagatgacaac
ctcctggagcactacgacagattcgacatgaacaaagacaccgacccacacccttatccc
ggcgttatcaaagaaatcaagtcggaagaccctgacatcgacttcgaagagctcagaaac
ccaggagaaatcacagtattcacactcaaccagttaaccacggaacagttcgacaaggcc
gtaaggaaaattattgatcagatcttcgaaaaagaatgggaagaaagtccaacactcgaa
ctattcatcgtattcgacgaagtacacagactactagaagaatacggaggagaaggagga
tacaaagcactcgaaaaaggagcaagagaattcagaaaatggggtataggcctcatgatg
tgctcgcaggttacagcagacttcaaacaagcaatctccggaaacatcatgacagaagta
caaatgcaaaccaaatccatggaagacatcaaaagaatcgagaaaaaatacggcgaacag
ttctcaaaaagaatatcctcggaggacgttggtacaggtatgatccagaactccaactac
aacgacggagacccatggttcgtagacttcagaccaacataccacaacccgcacaaaatc
ccggacgaagaactagaccaataccacgaactaacagaagaaatggacaaagtaaaagat
aaagtccaggaactcgaagaccaaggccaagacatgcaggacaaacaacttgaaatcaac
ctcgcagacaacaaactcaaagaaggccgcttcaaaatggcccgcatgtatatcgaaagc
ctcaaagacgaattggacatatcttaa
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