Candidatus Nanohalovita haloferacivicina: HBNXNv_0322
Help
Entry
HBNXNv_0322 CDS
T10381
Symbol
pcnA
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
nhf Candidatus Nanohalovita haloferacivicina
Pathway
nhf03030
DNA replication
nhf03410
Base excision repair
nhf03420
Nucleotide excision repair
nhf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBNXNv_0322 (pcnA)
03410 Base excision repair
HBNXNv_0322 (pcnA)
03420 Nucleotide excision repair
HBNXNv_0322 (pcnA)
03430 Mismatch repair
HBNXNv_0322 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhf03032
]
HBNXNv_0322 (pcnA)
03400 DNA repair and recombination proteins [BR:
nhf03400
]
HBNXNv_0322 (pcnA)
DNA replication proteins [BR:
nhf03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HBNXNv_0322 (pcnA)
DNA repair and recombination proteins [BR:
nhf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HBNXNv_0322 (pcnA)
MMR (mismatch excision repair)
Other MMR factors
HBNXNv_0322 (pcnA)
TLS (translesion DNA synthesis) factors
Other TLS factors
HBNXNv_0322 (pcnA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad1
KOW7_SPT5
Hus1
Motif
Other DBs
NCBI-ProteinID:
WEL23179
LinkDB
All DBs
Position
complement(301602..302354)
Genome browser
AA seq
250 aa
AA seq
DB search
MFKAEIEDVGLLQDSMKTISDLISEGLFQLKDDGIHLVAADPAMVGLVDFHIEKDVFENY
ELDEESKVGLNLENLYSILRRANSDDVITLEVKDDESKFYINMEGRSTRNFSLPILNLSE
DDIPSTDQLEFTFEGELETDVLESAIKDAMVVSDSVTVTASKDRIEIVAEGDQSDVDFKI
TEDSDGVIELSGEEAKSMFSLDYLSKMIGAKKLSDTVTVKMADEFPVRLEFTIPDEANLS
FVLAPRIEED
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaaagcagaaatcgaagatgttggacttctacaagactccatgaaaaccatttca
gatctaatcagtgaaggcctattccagttaaaggatgacggcattcacctggttgcagca
gaccctgcaatggtaggactagtagatttccacatcgaaaaagacgtattcgaaaattac
gaacttgatgaagaatcaaaagtaggtctaaatctagaaaatctatactcaattcttcga
agagcaaacagcgacgacgtaatcactctcgaagtaaaagacgatgaatccaagttttac
atcaatatggaaggccgcagcacaagaaacttctcgctgccaatcctcaacctttcagag
gacgacattccatcaacagaccaacttgaattcacattcgaaggagaacttgagaccgac
gtactggagagcgcaatcaaagacgcaatggtagtctcagactcagtaacagtaacagcc
tccaaggataggatcgagatagtagctgagggagaccagtccgacgtagacttcaagatc
acagaggactcagacggcgtaatcgagctatcaggagaagaggccaaatccatgttcagc
ctcgactacctgtccaaaatgatcggcgcaaagaaactaagcgacacagtaaccgtcaaa
atggccgacgaattcccagtaagactggaattcacaatcccagacgaagccaacctaagc
tttgtactggcaccacgcatcgaagaagattag
DBGET
integrated database retrieval system
