Candidatus Nanohalovita haloferacivicina: HBNXNv_0911
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Entry
HBNXNv_0911 CDS
T10381
Symbol
mscS4
Name
(GenBank) Small conductance mechanosensitive channel
Organism
nhf Candidatus Nanohalovita haloferacivicina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
Peptidase_C39_2
Peptidase_C39
EII-Sor
Phytochelatin
MS_channel_1st_1
DUF4271
Motif
Other DBs
NCBI-ProteinID:
WEL23749
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Position
814334..815896
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AA seq
520 aa
AA seq
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MAGILDSALAFIMSSNTSIRVAVTLLILVLGHLTVKSFNMIYNRLWILRNDESTKKDLER
KRQRLQYISYILDGLVITGALFYLNSSMTDQIITETATYIPDILTGFLVAILGVITINIF
ARFIEDFLKTVGVRNYFREAGLSVNAFKIVSTLIKGFLYLILLQIVLGQLGIAQSTINEL
VTASSWAVAFLIAGLVFYGFKDLFKNFAAGVYLKNSRIVRPGEEVKMDDETGEIKEVSLF
STTVDTNSGFTVLAPNSQIMDSNLKFKRTRSDLDTLEEITSYFVAQDPSFCGPASMEMAL
EIFGYRHDQKEIGEKANVEEGEGADEHVLMDSVEELTNNEVKTAWIGYDDITELDEEFKA
WFNDGALIVPNFYKPEIFPDATAGHFVLSVGVEGDEILILDPSGTNGGVYYVNKDQLKEA
MAEFGHKRGYIVVAPKGTTAHWRIKNDLIYADKSAYDELSKTLEARLRKILRQGRILKNS
TPSSMEDYMEKWGASEKLTRIWMPEQSKQGEDKDETTENN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggccggcattctagattctgcactagctttcatcatgtcaagcaacaccagcattaga
gtagcagttacactactaatcctagttctaggccacctcacagtaaaaagcttcaacatg
atctacaaccggctatggatactcagaaacgacgaatccaccaaaaaagacctcgaaaga
aaaagacagagactacagtacatatcatacatacttgacggcctcgtcataacaggagcc
ctattctacctaaactcctcaatgaccgatcagatcatcacagaaacagcaacatacatc
ccagacatactaacaggatttctagtagcaatcctaggagtaataacaataaacatattc
gcaagattcatagaggacttcctcaaaacagttggagtcagaaactacttcagagaagca
ggcctatcagtaaacgcattcaaaatagtatcaacactcatcaaaggattcctatacctg
atcctactacaaatagtactaggccaactaggaatcgcacaaagcacaatcaacgagcta
gtaacagcatcatcatgggccgtagcattcctcatcgcaggcctcgtattctacggattt
aaagacctgttcaagaacttcgcagcaggagtatacctcaagaactccagaatagtaagg
cctggcgaggaagtcaagatggacgatgaaacaggagaaatcaaggaagtatcgctcttc
agcactacggtcgacacaaactcaggtttcacagtgctggcaccgaacagccagatcatg
gactcaaacctcaagttcaagagaacaagaagcgacctcgacacgctggaagaaataaca
agctacttcgtagcacaggacccatcattctgcggtccagcatcaatggaaatggccctc
gaaatcttcggatacagacacgaccagaaagaaataggagaaaaagcaaacgtcgaagaa
ggagaaggagccgacgaacacgtcctaatggactcagtagaagaactaacaaacaacgaa
gtcaaaacagcatggatcggctacgatgacatcacagaacttgacgaagaattcaaggcc
tggttcaacgacggagcactaatcgttccgaacttctacaaaccagaaatattcccagat
gcaacagcaggccacttcgtactatcagtcggagtagaaggagatgaaatactcatcctt
gatccaagtggaacaaacggaggagtatactacgtaaacaaagaccagctgaaagaagca
atggcagagttcggccacaagagaggatacatcgtggtcgcaccaaaaggaacaacagca
cactggagaatcaagaacgacctaatctacgcagacaaaagcgcctacgacgaactatcc
aagacactggaagcccgactaagaaagattctaagacagggccgcatcctgaaaaactcc
acaccttcctcaatggaagactacatggagaaatggggcgcaagcgagaaattaacacga
atatggatgccagaacaatcaaaacagggggaggacaaagatgaaactactgaaaataac
tga
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