Candidatus Nanohalovita haloferacivicina: HBNXNv_1063
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Entry
HBNXNv_1063 CDS
T10381
Symbol
fen1
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
nhf Candidatus Nanohalovita haloferacivicina
Pathway
nhf03030
DNA replication
nhf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBNXNv_1063 (fen1)
03410 Base excision repair
HBNXNv_1063 (fen1)
03450 Non-homologous end-joining
HBNXNv_1063 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhf03032
]
HBNXNv_1063 (fen1)
03400 DNA repair and recombination proteins [BR:
nhf03400
]
HBNXNv_1063 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nhf04147
]
HBNXNv_1063 (fen1)
DNA replication proteins [BR:
nhf03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HBNXNv_1063 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
HBNXNv_1063 (fen1)
DNA repair and recombination proteins [BR:
nhf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HBNXNv_1063 (fen1)
Exosome [BR:
nhf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HBNXNv_1063 (fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
DNA_pol_lambd_f
5_3_exonuc_N
ANKFN1_ab
Motif
Other DBs
NCBI-ProteinID:
WEL23886
LinkDB
All DBs
Position
930878..931909
Genome browser
AA seq
343 aa
AA seq
DB search
MGVNLGELVESEEISFADLNDKEIAIDAMNTLYQFLSIIRQRDGTPLKDSSGEVTSHLSG
LFYRNINLLDNNIRPVFVFDGEAPDLKEKETTQRRKKREEAREEWKKLKDEGKVSEAYSK
ATQSSKLTGDMIKESKRLLDAMGIPYVQAPSEGEAQTAYMTHEDYPGSIYAAGSQDWDSL
LFGAEKMVKNLTTRKTRKTSGGGRKEISTELIRLDSVLEQLEVSQEELIWMGVLMGTDFN
PDGVHGIGPKTALKLVKKYNSWDKLFEDDKVEWESDNDPETIIEFFKNPPVEDIEYEFGD
PDEEKIKEILVDDHDFSEDRVESGLKDLSNALSSRQSGLDSFT
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggagttaaccttggagaactggttgagagcgaggaaataagttttgcagatttaaac
gataaagagatagcgatcgatgctatgaataccttgtaccagtttctctctattatccgt
cagcgagacggtactccactgaaggattcgtccggagaagttacttctcatctttcaggc
ctcttctacagaaacattaatctccttgacaataatatcaggcctgtcttcgtttttgac
ggcgaggctcctgatctcaaggagaaagagaccacgcagagaaggaagaagcgggaagag
gcccgtgaggagtggaagaagttgaaggatgagggcaaggtttctgaggcttacagtaag
gccactcaatcgagtaagttgactggtgatatgattaaggagtcgaagaggcttcttgat
gctatgggtattccctatgttcaggctcctagcgagggcgaggcccagacagcttacatg
actcatgaagattatcctggtagtatctatgctgcgggttctcaggactgggattctctg
ctttttggcgctgagaagatggtgaagaatcttactacaagaaagactcggaagacctct
ggtggaggtagaaaggagatttccacagagctaatcaggcttgatagtgttcttgagcag
cttgaagtctctcaggaagagctgatctggatgggagttctgatgggcacggatttcaac
cctgatggagtacatggtatcgggcctaagaccgctctaaagcttgttaaaaagtataat
tcctgggataagctgtttgaagacgataaggttgagtgggagtcggataacgatccggag
acaattattgagtttttcaagaatcctcctgttgaggatatcgagtatgagttcggtgat
cctgatgaggagaagattaaggagattctcgtggatgaccacgatttctccgaagataga
gtagaatcaggcctgaaagacctttccaacgcgttgagttcgcgtcagtcaggccttgat
agctttacctag
DBGET
integrated database retrieval system
