Candidatus Nanopelagicus hibericus: B1s21160_00030
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Entry
B1s21160_00030 CDS
T05090
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhi03032
]
B1s21160_00030
03400 DNA repair and recombination proteins [BR:
nhi03400
]
B1s21160_00030
Enzymes [BR:
nhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B1s21160_00030
DNA replication proteins [BR:
nhi03032
]
Prokaryotic type
DNA Topoisomerases
B1s21160_00030
DNA repair and recombination proteins [BR:
nhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B1s21160_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FaeA
Motif
Other DBs
NCBI-ProteinID:
ASY12773
UniProt:
A0A249K7K4
LinkDB
All DBs
Position
6733..9216
Genome browser
AA seq
827 aa
AA seq
DB search
MDKTFTDNETEHGRDRQESVDLQVEMARSYLDYAMSVIVGRALPDIRDGLKPVHRRVLYA
MFDAGYRPDKGYYKSSRIVGDVMGNYHPHGDTAIYDAVVRLAQFWSLRYPLIDGNGNFGS
PGNDPAAAMRYTEARLAPLAMEMMRDIDEETVDFIPNYDGRSQEPTVLPSRFPNLLVNGS
AGIAVGMATNIPPHNLNEVIEATCFALENSEMKSDELLKKLMGIVKGPDFPTKALIVGRG
GIEDAYRTGRGSVIMRAVVEVEEINKRTCLVVTELPYQVNPDNLALKIAELVKDGRIKGI
ADVRDEGNERLGQRLVIVLRNDAVAKVVLNNLYKHTQLQDSFGANMLALVDGVPRTLRLD
EFIRYYIEHQVEVIVRRSKYRLVEREKRDHILQGYLKALDALDAVIALIRASKTPEEARS
GLMKLLSVDELQANAILDMQLRRIAALERQRIIDEHDELMKEIKELKVILASPEKQRTII
KSELTEVGSKYGNDRRTQIIAGDTDLSVEDLIPDQDVVVTITKGGYSKRTKAEAYRAQKR
GGKGVKGAALKTDDVVEHFFTASTHNWLLFFTNKGRVYRAKVHELPDAGRDARGQHVANL
LAFKPDELIAQVIAISDYSTQPYLVIATKAGIVKKTPLVEYDSPRSGGLIAVSLKANDEV
VSATLVSDKEELLLVSKMGMSLRFAANDENLRPMGRGATGVIGMKFRKGDNLLAMAAISS
DNKNYVFTATNGGYAKRTKLEEYRTQNRGGVGVKAAKINENSRGVLVGAMIVQESDEILA
ISSAGTVMRTPLTQIRETGRDTLGVRLVNLDAGISVVSVTRLVDDLD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggataagacgtttaccgataatgaaactgaacatggacgtgatcgacaagagtcggta
gatctgcaagttgagatggctaggtcatacctagattacgcaatgagcgtaattgttggt
agagcgctaccggatattagagatggtttaaaaccagtacaccgcagggttttatatgca
atgtttgatgctggttacagaccagataagggttattacaaatcatctcgaattgttgga
gatgtgatgggaaattaccacccacatggtgataccgctatttatgacgcagtagttcgc
ttggcacagttctggtcacttcgctatccattaattgatggcaatggaaactttggctcc
cctggtaatgatccagctgctgcaatgcgttacaccgaagctcggcttgcaccacttgca
atggagatgatgcgagacattgatgaagaaacagttgattttattccaaattacgacggc
agatcacaagagccaacagttttaccatctcgctttccaaacttattagtaaatggatct
gccggtattgcagttggtatggcaacaaatatcccaccacataatttaaatgaggttatt
gaggcgacatgttttgcactagaaaactcagagatgaaatctgatgagttattaaaaaaa
ctaatgggaattgttaagggtcccgactttccaaccaaagcattaattgttggcagaggt
ggaattgaggatgcatatcgaaccggccgtggctcagtaattatgcgagcagttgttgag
gttgaagagattaataagcgcacttgcctggttgtgaccgagcttccttatcaagtaaac
ccagataacttagcgttaaaaattgcagagctggtcaaagacggccggattaaaggaatt
gcagatgttagggatgaaggaaatgaacgtttaggacaaagattagtaattgttcttaga
aatgatgcggtagcaaaggttgtcttaaacaatctctataaacacacccaattacaagat
tcattcggtgcaaatatgttggcgctagttgatggcgtgccaagaactttgcggcttgat
gagttcatccgttactacattgagcatcaagttgaggtaattgtcagacgaagcaagtac
cgtttagttgagcgggaaaaaagagatcacatactgcaaggttatttaaaagcccttgat
gcgttggatgcagtaatcgccttaattagagcaagcaagacgccggaagaggcccgttct
gggttgatgaaattactttcagtagatgaattacaagcgaatgcgatcttggatatgcag
ttgcgcagaatcgcagctttagagcggcagagaattattgatgaacatgatgaattaatg
aaggagatcaaagagttaaaggtgattttagctagccctgaaaagcagcgaaccataatc
aaaagtgagctaacagaggttggttcaaagtatggcaatgatcgacgtacccaaataatc
gcaggagataccgatttgtctgttgaggatttaattcctgatcaagatgtggtggtgaca
attaccaaaggcgggtactcaaaacggactaaggctgaggcttatcgggctcaaaaacgt
ggcggtaaaggcgtaaagggagcggcattaaaaaccgatgatgtagttgaacacttcttt
actgcaagcacacacaactggttattattttttaccaacaaagggcgggtatatcgtgcc
aaagttcatgaactacccgatgcaggaagagatgccagaggacagcacgtggcaaatctt
ttagcatttaagccagatgagttaatcgctcaagttattgcaatctcagattactcaact
caaccttatttagtaattgccacaaaagctggcattgttaagaagacaccattggttgag
tatgactcaccaagaagtggtggcttaattgcggtttcacttaaagcaaatgatgaggtg
gtctcagcaacattagtaagtgacaaggaagagttgttattggtttcaaagatgggaatg
tcacttcggtttgcagctaatgatgaaaaccttcgaccaatgggaagaggagcaaccggt
gttattgggatgaaatttagaaaaggtgacaacctattagcgatggcagcaattagtagt
gataataaaaattacgtatttactgcaactaatggtggttatgccaaacgaacaaagctt
gaggagtatcgaactcaaaacagaggtggagttggagttaaagctgcaaagattaacgaa
aattctcgaggtgtattagtaggggcgatgattgtgcaagaaagtgatgagattcttgcg
atctcatcagctggcacagtaatgcgcacaccattgacacaaatcagagagactggcagg
gacaccttgggtgtaaggctggttaacctagatgctggaatctcagtagtatctgttact
cgtttagttgatgatcttgattaa
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