Candidatus Nanopelagicus hibericus: B1s21160_00860
Help
Entry
B1s21160_00860 CDS
T05090
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Pathway
nhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1s21160_00860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhi03019
]
B1s21160_00860
03110 Chaperones and folding catalysts [BR:
nhi03110
]
B1s21160_00860
03029 Mitochondrial biogenesis [BR:
nhi03029
]
B1s21160_00860
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nhi04147
]
B1s21160_00860
Enzymes [BR:
nhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
B1s21160_00860
Messenger RNA biogenesis [BR:
nhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
B1s21160_00860
Chaperones and folding catalysts [BR:
nhi03110
]
Heat shock proteins
HSP60 / Chaperonin
B1s21160_00860
Mitochondrial biogenesis [BR:
nhi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
B1s21160_00860
Exosome [BR:
nhi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
B1s21160_00860
Exosomal proteins of other body fluids (saliva and urine)
B1s21160_00860
Exosomal proteins of breast cancer cells
B1s21160_00860
Exosomal proteins of colorectal cancer cells
B1s21160_00860
Exosomal proteins of bladder cancer cells
B1s21160_00860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
DUF3568
Motif
Other DBs
NCBI-ProteinID:
ASY12922
UniProt:
A0A249K841
LinkDB
All DBs
Position
162004..163638
Genome browser
AA seq
544 aa
AA seq
DB search
MGKSLQFDEAARRAMERGVNILADTVKVTLGPKGRNVVIAKSYGAPTITNDGVTIAKEIE
LSDPAENMGAQLVKQVAEKTNDVAGDGTTTATVLAQAMVKEGLRNLAAGAQPMELKYGIE
QAVNAITEALRKNSTAVSGKSQIADVATISAQDKAIGDLIAEAMDKVGKDGVITVEESST
TGLELEFTEGMQFDKGYISPYFVTDSDRMETVLEDAYILISGQKISALSEILPVLEKVAQ
ASKPLLIIAEDVEGEALSTLVVNRMRGTFASAAVKAPGFGDRRKAMLDDIAVLTGGQVIS
AEVGLKLEQIDIAMLGKARRVVISKDNTTIVDGAGDKKAVAARVTEIRREIENTDSDWDR
EKLQERVAKLAGGVCVIKVGAHTEVELKEKKHRLEDAISATRAAVEEGIVVGGGAALVHA
AAALDNDLGFEGDRAVGVRLVRKACDEPLRWIAENAGQEGYVVVSKVRTMKPNEGFNAFS
ETYTDLVKEGVIDPVKVTRSALANAASIAAMFITTEALVFETPEEKKEEAAGHGHSHGPG
GHSH
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgggtaaatcacttcaatttgatgaagcagcaagacgtgcgatggagcgcggagtaaat
atccttgctgacacagtaaaggtaacccttggaccaaagggtcgtaacgtagttattgct
aagagttatggcgcaccaaccatcaccaatgatggtgtaactattgccaaagagattgaa
ctatctgacccagctgaaaacatgggtgcacaacttgttaagcaggttgcagaaaaaact
aatgatgtcgcaggagatggcacaactactgccacagttcttgcccaagcaatggtgaaa
gaggggctgcgaaatcttgcagcaggtgcccagccaatggagcttaaatacggtattgag
caagcggtaaatgcaattactgaagcgctacgtaaaaactcaactgcagttagtggaaag
tcacagattgcagatgtagcaaccatttcagctcaagataaagcaattggtgatttaatc
gcagaggcgatggacaaggttggcaaagatggcgttattaccgttgaagagtcatctacc
actgggcttgagcttgagttcactgaaggtatgcaatttgataagggttatatctcacct
tactttgtcaccgattcagatcggatggagacagttttagaagatgcctacattcttatc
tctggtcagaaaatctcagcattaagtgagatcttgccggtattagaaaaggtcgcacaa
gcaagtaagccgctattaattattgctgaagatgttgagggtgaagcactttcaaccttg
gtagtaaatcgcatgcgtggcacctttgcctcagccgcagttaaggcaccaggctttgga
gataggcgtaaagcgatgctagatgacattgcagttttaactggcggacaggttatttca
gctgaggttggcttaaaacttgagcagatagatatcgcaatgttgggtaaggctcgcaga
gttgttatttcaaaagataacaccacaattgttgatggcgccggtgataagaaggctgtc
gcagcgcgagtaactgagattcgtcgggagattgaaaacaccgactctgattgggatcgc
gaaaaactacaggagcgagtagcaaaacttgctggtggagtttgtgtaatcaaagttggt
gcacacactgaggttgagttgaaggagaagaagcatcgtcttgaggatgcaatctctgca
actagagctgcggttgaagagggaattgttgttggtggaggtgctgcattagtacatgct
gcagccgcacttgataatgatttaggttttgaaggtgatcgagcagttggtgttcgtcta
gtccgtaaggcatgtgatgagccacttcgttggattgcagaaaatgctggccaagaaggc
tatgttgtagtttcaaaggttcgcaccatgaaacctaatgaaggttttaatgctttctcc
gagacttacaccgatcttgttaaagagggtgtaattgatccagttaaagtaactagatca
gcactggcaaatgcggcatcaattgcagcaatgtttattactactgaagcacttgtcttt
gaaactccggaagagaagaaggaagaggccgccggtcatggccactcacacggaccaggc
gggcactctcactaa
DBGET
integrated database retrieval system
