Candidatus Nanopelagicus hibericus: B1s21160_00885
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Entry
B1s21160_00885 CDS
T05090
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Pathway
nhi03420
Nucleotide excision repair
nhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B1s21160_00885
03430 Mismatch repair
B1s21160_00885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhi03400
]
B1s21160_00885
Enzymes [BR:
nhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1s21160_00885
DNA repair and recombination proteins [BR:
nhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1s21160_00885
MMR (mismatch excision repair)
Other MMR factors
B1s21160_00885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASY12926
UniProt:
A0A249K871
LinkDB
All DBs
Position
167133..169346
Genome browser
AA seq
737 aa
AA seq
DB search
MSALTDGLNPQQLAAVKHSGSPLLVVAGAGSGKTRVLTRRVAYLLAERNVAPYEVLAITF
TNKAAGEMKERVAQLVGDRAKMMWVSTFHSACVRILRREAALLGYSNSFTIYDQSDSLRL
VTLVMRDLNLDAKRYAPRAVAALISQAKNELLGPADYLNQSKDHFQEIVAQVFAIYQKRL
SAANSMDFDDLIAKTVEVMQRFPECRAKYRSRFKHILVDEYQDTNHAQYVLIKELVGSEQ
EGFPPAELCVVGDADQSIYAFRGANIRNILQFEADYPNAKTILLEQNYRSTQNILNAANS
VIANNEGRKEKNLWSEAGAGELITGYVAESEHDEADFVVQQIRKLQDSGKSNPGDTAIFY
RTNAQSRVFEEVFMRVAIPYKVVGGVRFYERKEIKDFLAYLRVIVNPNDEVSMRRIINTP
KRGIGDRALDQLDLYAQANNISFWQALTEVEKNSDIAPRSAASLVEFVKFIQSLQTLVEA
KTRPSVIAQATLEQSGLLAELSQSNDPQDEVRIENLEELVAVATEYEEGEVDEGEEISLV
GFLEDVSLVADADQIPEGEDHGGVVTMMTLHTAKGLEFPTVFLTGMEEGIFPHSRTLGDP
DELQEERRLAYVGLTRARQNLFITRAEYRSSWGAPNYNPASRFLSEIPDSVIEWNQSAER
FSPMKTSIKRSFIPSKATGKISNTMKLEVGERVSHDTFGLGTVVAVTGEADRAEATINFG
SFGEKRLLLRYAPVEKL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcttaccgatggtctaaatcctcaacaattagcagcggttaagcactctgga
tcaccattattagttgttgctggtgcgggctctggtaaaacgcgagtattaaccagacga
gtggcttatttattagcagagcgcaatgttgcaccatatgaggtattagccattaccttc
actaataaagcagctggtgagatgaaggagcgggttgcgcaattagttggtgatcgagca
aagatgatgtgggtatcaacctttcactcagcctgcgttcgaattttgcgcagggaggct
gcattacttggatattcaaactcatttacaatctatgatcaaagtgattcattaagacta
gtcaccttagtaatgcgagatctaaatcttgacgccaaacggtatgcaccaagagcggta
gcagcactaatctcccaagcaaaaaatgagttactgggcccggctgattatctaaatcag
agcaaagatcacttccaggagattgttgcccaagtttttgccatttatcaaaagcgatta
tcagctgctaactctatggattttgatgatctgattgctaaaacagttgaggtgatgcag
cgatttcctgagtgccgggcgaagtatcgatcacgctttaaacatatcttggtagatgag
tatcaggacacaaatcatgcccagtatgtattaatcaaagagttagttggcagtgagcaa
gagggtttcccgccagcagagctttgtgttgtgggagatgctgatcaatcgatctacgct
tttcgtggagctaatattcgcaatattttgcagtttgaagctgattacccaaatgctaaa
actattttattagagcaaaattatcgatctacccaaaacatcttaaatgcagctaactcc
gtgattgccaacaatgagggacgaaaagagaagaatttatggtctgaggctggcgctggt
gagttgattactggatatgtggcagaaagtgaacatgatgaggcggattttgttgttcag
caaatccgtaaactacaagactctggtaaatctaatcctggagataccgctattttttat
cgaaccaatgcgcaatctcgggtatttgaagaggtatttatgcgagtagctattccctac
aaagtagttggcggggtgaggttttatgagcgaaaagagattaaggatttcctggcatac
ctgcgagtgatagttaatccaaatgatgaagtatcaatgcgcagaatcattaacactcct
aaacgaggtattggtgatcgggcgttagatcaattagatctatacgctcaagcaaataac
atcagcttttggcaagcgctaactgaggtcgagaaaaactcagatatcgcaccaagatct
gctgcctcactagttgaatttgttaaattcattcaatccctacaaactttagtagaggca
aaaactcggccttcagtaattgcgcaagcaacccttgaacaatctggtttgttagctgag
ttatcgcagagtaatgacccacaagatgaggtaaggattgaaaacttagaggagttagtt
gcagtggccactgagtatgaagagggtgaggtagatgaaggtgaagagatttctttagtt
ggcttcttagaggatgtctcacttgttgcagatgctgatcaaattccagagggagaggat
catggtggtgttgtaactatgatgacactgcacaccgctaaaggcttagagtttccaact
gttttcttaactggaatggaagagggaattttcccccactctagaactcttggtgatcca
gatgaattgcaagaggagcgccggcttgcctacgttggcctgaccagagctaggcagaat
ttatttatcaccagggctgagtatcgatcctcttggggagcgccaaattacaacccggct
tcaagatttttaagtgaaattccagactcggtaattgaatggaaccaaagcgcagagaga
ttttcaccgatgaaaacttcaataaaaagatcattcattccatctaaagcaaccggcaag
atcagcaatacgatgaagcttgaggttggtgagcgagtttcccacgacacctttggatta
ggaacagtggttgccgttactggtgaggcagatcgcgctgaggcaactattaattttggc
tcatttggtgagaagcgactactgcttcgttatgcaccagttgagaaattataa
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