Candidatus Nanopelagicus hibericus: B1s21160_02880
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Entry
B1s21160_02880 CDS
T05090
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Pathway
nhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1s21160_02880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhi03400
]
B1s21160_02880
Enzymes [BR:
nhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
B1s21160_02880
DNA repair and recombination proteins [BR:
nhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1s21160_02880
RecFOR pathway proteins
B1s21160_02880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
MadL
RuvX
Motif
Other DBs
NCBI-ProteinID:
ASY13282
UniProt:
A0A249K927
LinkDB
All DBs
Position
543939..544460
Genome browser
AA seq
173 aa
AA seq
DB search
MRVLGIDPGLTRCGVGVVDSTGPQKLALIAVGVIKTDIDVSLDQRLLQLEKEISIWINKY
QPDVVAVERVFSKLNVKTAMATGQAAGVALLLAAKVGIPVVMHTPSEVKAAVTGSGRADK
KQVAQMVKRLLKLKEIPKPVDATDALALAICHHWRGVGNARLAKAKKKASKKK
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttggggatagatcctggattgaccaggtgtggtgttggtgtagttgattca
actggtccccaaaaacttgcgttgatcgcagttggagtaataaaaacagatattgatgta
tcccttgatcaaagattgctgcagttggaaaaagaaatctcaatctggattaataagtat
cagccagatgtggttgcagtagagcgggtattttcaaaactaaatgttaaaacagcgatg
gcaaccgggcaggctgcaggagttgccttacttttagctgcaaaagttggtattcctgta
gtcatgcacacccccagcgaggttaaagcagcggtaaccggttctggtcgggctgataag
aaacaggtggcacaaatggtaaaacgtctgttaaaactgaaggaaatcccgaaaccagta
gatgccaccgatgctctagcccttgcgatctgccatcattggcgtggagtgggcaatgca
agattagctaaagcgaagaaaaaggcgagtaagaaaaaatga
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