Candidatus Nanopelagicus hibericus: B1s21160_03040
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Entry
B1s21160_03040 CDS
T05090
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Pathway
nhi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B1s21160_03040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhi03021
]
B1s21160_03040
03400 DNA repair and recombination proteins [BR:
nhi03400
]
B1s21160_03040
Enzymes [BR:
nhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B1s21160_03040
Transcription machinery [BR:
nhi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B1s21160_03040
DNA repair and recombination proteins [BR:
nhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B1s21160_03040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ASY13310
UniProt:
A0A249K943
LinkDB
All DBs
Position
577206..577484
Genome browser
AA seq
92 aa
AA seq
DB search
MSNQALDGITNPPIDALLDKAGSKYSLVLYAAKRARQINAYYSQLGEGLLEYVGPLVETY
VHEKPLSIALREINDGLLTIENLEPKQTPTAG
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaagcactagatggaattactaatccaccaatcgacgcgttattagataaa
gctggatcgaaatatagcttggtactttatgcagctaagcgagcccgccaaattaatgca
tactattcacaacttggtgagggattattggaatatgtggggccactggtcgaaacttat
gtgcatgaaaaaccattatctattgcgttaagagaaatcaacgatggcttgcttactatt
gagaatttagaaccaaagcaaactcctacagctggctaa
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