Candidatus Nanopelagicus hibericus: B1s21160_03210
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Entry
B1s21160_03210 CDS
T05090
Name
(GenBank) ATP-dependent RNA helicase HelY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhi03019
]
B1s21160_03210
Enzymes [BR:
nhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B1s21160_03210
Messenger RNA biogenesis [BR:
nhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B1s21160_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
MTR4-like_stalk
Fib_alpha
AAA_30
nSTAND_NTPase5
CENP-Q
Peptidase_M36
TAF4
DUF4175
Motif
Other DBs
NCBI-ProteinID:
ASY13340
UniProt:
A0A249K970
LinkDB
All DBs
Position
609016..611358
Genome browser
AA seq
780 aa
AA seq
DB search
MTLSPSESYAKSKQAGKFPKTRKFSEGFPFELDQFQIDACHALESGKGVLVAAPTGAGKT
IVGEFAVDLVINSGGKCFYTTPIKALSNQKYTELVAKYGEDRIGLLTGDTSVNSEAQIVV
MTTEILRNMIYSNSQTINDLKYVVMDEVHYLADKFRGAVWEEILIHLSDAVQIISLSATV
SNAEEFGEWLQTVRGETEVIVSEIRPVPLYQHVLFGNRLLDLFGENQKLNPELTRLERDT
YRQVRGNWRDRPKGPKPLSRSEIIEKLDRENLLPAITFIFSRNNCDAAVRQCLAAGIKLT
NTEERSEIRSVIARNIKNLAEEDLVVLGYYEWADALERGIAAHHAGLLPAFKVTVEELFQ
KGYVKAVFATETLALGINMPARTVVLEKLSKWNGEAHVAISPGEYTQLTGRAGRRGIDIE
GNAVILWNNDLDSTSVGGLASTRTYPLKSSFKPTYNMSINLISQFGSERARTSLESSLAQ
FQADKAVVGLAKQIRKNEKLRDELYQQAKCHLGDFMQYSEMRSQIKKLESDNKRSKRKRH
EIEEEIGNIRKLLKNHACHSCPDRENHSRFAERAQRLQREIDGLTERINSRTNVIAKRFD
LIKVILDKFGYIKADEIAKSGKMLAKIYGETDLLVAETVQAGILNTLTPADLVAVVSTYV
YESRNEEAAKVPRGEVAVALASISKIYAKIHEAESELNLEPMRAPDFGFCWASQKWAAGQ
SLTSILKGSDLTVGDFVRSMKQIIDLLRQLRAAAPQLQPIIDQSLTKIDRGVITYAGAAV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctttcaccttcagaaagctacgcaaagagtaagcaggcggggaagtttcctaaa
acccgcaaattctcggaaggttttccttttgaactagaccagtttcagattgatgcctgt
catgcattagaaagtggtaaaggggtattagttgctgcaccaaccggtgcaggtaaaaca
attgttggtgaatttgctgttgatttagtcataaattcaggtggcaaatgcttttatacg
acaccgattaaagcccttagtaatcaaaaatacaccgaacttgttgctaaatacggtgag
gatcgaataggcctgcttactggtgacacttcagtaaattctgaagcgcaaatagtagtt
atgactacggaaatattgagaaatatgatttattccaattcacaaacaattaatgatctc
aagtatgtggttatggatgaggtgcattaccttgccgataagtttcgtggcgccgtttgg
gaggagatattgattcacctctcagatgcagtacagatcatttcactttcagcgactgta
tcaaatgctgaagagtttggtgaatggttgcagacagttagaggagagaccgaggttatt
gtaagtgaaataaggccagttccactttatcagcatgtactttttggtaatcgcttattg
gatctatttggagaaaatcaaaaactcaatcctgagttaacccggttagaacgcgatact
tatcgtcaagttcgtggaaattggcgcgatcggccgaaaggtccaaaacccctatctaga
tctgagattattgaaaaacttgatcgtgaaaatctgctgccggcaattactttcattttt
tctagaaacaattgcgatgcagctgttaggcagtgtcttgccgctggaattaaattaacc
aacactgaagagagatctgaaatccgatcagtgatagctagaaatatcaagaatttagcg
gaggaggatttagtagttcttggatattatgaatgggctgatgcgttagaacgtgggatt
gctgcccatcacgctggattactaccagcttttaaagtgactgttgaggagttatttcaa
aaaggatatgtaaaggctgtgtttgcgacagaaaccttggcactcggaattaatatgcca
gcgcgaacagtagttctagagaaattgagcaaatggaacggtgaggctcatgtggcaatc
tcaccaggtgagtacacacaattgactggaagagccggtcgccgaggcattgatattgag
ggcaatgcggtaattctttggaataacgatttggactctacctctgttggtggtttagcc
tcaactagaacttatccactgaagagttctttcaagccaacatacaatatgagtattaat
ctaatctcacaatttggatccgaaagagctagaacctccttggaatcctcactagcccag
tttcaagccgacaaagcggtagtaggtcttgcgaagcaaatacgcaagaatgaaaaattg
cgggatgagttatatcagcaggcaaaatgccatcttggagattttatgcagtactcagag
atgcgatctcaaattaagaagttggagagtgataacaagcgaagcaaacgtaagcggcat
gaaatcgaggaagagattggaaacattcgcaaacttctaaagaatcatgcttgtcacagt
tgtccagatcgagagaatcactccagatttgcagaacgagctcagaggctacagcgagaa
attgatggactgaccgagcgcattaactctcgcacaaatgttatcgcgaagagatttgat
ttgattaaggttattcttgacaagtttggatatataaaagctgatgaaattgctaaatca
ggaaaaatgttggcaaagatatatggtgaaactgatttgcttgttgctgagactgtacaa
gctggcattttaaatactctcacacctgctgaccttgtcgcggttgtttctacctatgtt
tatgagtcaagaaatgaagaagcggctaaagttccccgtggagaggttgcagttgcatta
gcatcgatttccaaaatttatgcaaaaatacatgaggcggagagtgaattaaatttagag
ccgatgcgagcacccgatttcggtttctgttgggcttcacaaaaatgggcggctggtcaa
tcactcacctccattttgaaaggaagtgatttgactgtgggcgatttcgttaggtcaatg
aagcaaataattgatttgctgcgccagttaagagctgcagcgccgcaattacaacccatt
atcgatcaatcgctgacaaagattgatcgtggggttattacctacgccggagcggctgta
tga
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