Candidatus Nanopelagicus hibericus: B1s21160_03370
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Entry
B1s21160_03370 CDS
T05090
Name
(GenBank) phenylalanyl-tRNA synthetase beta chain
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Pathway
nhi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
B1s21160_03370
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nhi01007
]
B1s21160_03370
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nhi03016
]
B1s21160_03370
Enzymes [BR:
nhi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
B1s21160_03370
Amino acid related enzymes [BR:
nhi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
B1s21160_03370
Transfer RNA biogenesis [BR:
nhi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
B1s21160_03370
Prokaryotic type
B1s21160_03370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ASY13369
UniProt:
A0A249K9F9
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All DBs
Position
complement(644593..647052)
Genome browser
AA seq
819 aa
AA seq
DB search
MKVPLSWLSEYVKLPPKITTDQIAQAFVNVGFEVEAIDRQGQNLKGPILVGKVKSIEELP
ENRKPIRYVGLDLGDKQIRYVICGARNFKVNDLVVVALPGAVLPGNFAISARQTYGRLSD
GMICSAKELGISDEHAGIIVLPQGEIGNDAIKLLDISDVVFDIAINPDRGYAMSVRGLAR
ELAGSLKCKFVDPADLKISKQFKPVKTSKAVSVKIEDKTGADQIYIRTIENVNMKKPTPI
WMQRRIEKCGMRSISLAVDITNYVMLELGQPLHAFDADMVVGGLRVVRAGKFKRLTTLDK
VDRDLDSDNLLICDSKAPLALAGTMGGLASEVSSTTNRIALEAAHFDPISVARNSRSHKL
SSEASRRIERNTDPMMAEIASARAVNLLVDLAEAKYVGSSIGGAPIKKRKLKVSIAKVSK
FIGYSYSIKQVKDSLTSIGCKVSGSGDLIAIEIPTWRPDLNSMADFAEEIARLNGYQLIA
SRLPIGKTGGALNKMQQRKRQVAQMLANQGFSEVINYPFVSQELVDLLGFTGDRAKSFKI
ANPISAETPLLRTHLLPGLLTTLERNVSRGVKDLAIFEIGSVFRNTSTLNRAVMPETSRR
PSAKSIDAIYSGVPKQMLFIGAVVAGEALLSNWQGKGVKFFWSDAIAKAIEIVESTGNDF
EVVSSSLAPWHPGRCAEIRVGGKPIAHAGELHPRVISSLDLPERTCAFAVILSELPSAQT
TKAPSIWNQPATVQDIALIVNKDVAAAEVEKALRSGAGNLLESILLFDRYDQIGEGKVSL
AFTLSFRASDRTLTADEVAGYRDAAVAAAARSCGVVLRS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcccattaagttggttgagcgaatatgtgaaattaccgccaaaaattactacc
gatcaaattgcccaggcctttgtcaatgttggatttgaagttgaggctatcgatcggcaa
ggtcaaaatttgaaggggccgattttagttggcaaggtaaaatcaattgaggagcttcca
gaaaataggaaacctattcgttatgtgggccttgatcttggcgataaacaaatcaggtat
gtcatttgcggagcaagaaacttcaaagtaaatgatctagttgtggtggcacttcccggc
gctgtattacctggaaattttgcgatttctgctcgacaaacctatggcagattaagtgat
ggcatgatttgttctgccaaagaattgggtatcagcgatgaacatgctggcattattgtg
ttgcctcaaggagaaatcggaaatgatgcgatcaagctacttgatatatcagatgttgtt
tttgatatcgcaatcaatccagatcgaggatatgcaatgtcggtacgaggtctggccaga
gaattggccggttccttaaagtgtaagttcgtggatccagccgacctcaaaatttccaag
caattcaaaccggttaaaaccagcaaagcggtctcggtaaagattgaagataaaactggt
gcggatcaaatatacattcgaaccattgaaaatgtaaatatgaaaaaaccaacaccgata
tggatgcaacgacggatagaaaaatgcggtatgcggtcaatttcattggctgttgatata
actaattatgtaatgttggagttaggccaaccactgcatgcctttgatgcagacatggtg
gttggtggtttacgtgttgtgcgggcaggtaaattcaaaagattgaccacattagacaaa
gtagatcgtgatttagattcagataatttattgatatgtgatagcaaagcaccactcgca
ttggcgggcactatgggaggcctagcttcagaggtgtcatctacaacaaatagaattgca
cttgaagcagcccattttgatccgattagcgttgcgagaaactctcgctcacacaaactt
tctagtgaggcatcacgcagaatcgaacgaaacactgatccaatgatggctgaaatcgct
tcagctagagcggtcaatttgctagtcgatcttgcagaggcaaagtatgtgggcagctca
atcggtggtgcgccgatcaagaaacgtaaattaaaagttagcattgcaaaagtatctaaa
ttcattggttactcatactcgataaagcaagttaaagattctctgacatcgattggttgc
aaggtaagtggcagcggtgacttgattgcaattgaaatcccaacttggcgtccagattta
aatagcatggcagattttgcggaagagattgctagattaaatggttatcaacttattgca
tctagattgccaataggcaaaactggtggcgctctgaataaaatgcaacaacgtaagcgc
caagttgcacaaatgttggccaatcaaggtttttcagaggttattaactatccatttgta
tctcaggagttggttgatttactgggcttcacaggagatcgagcaaagtcattcaagatt
gcaaaccctatctctgccgagacaccattgctgcgtactcatttactacccgggttactc
actaccttggagcgaaatgtgagtagaggtgtgaaagatcttgcaatctttgaaattgga
tctgtctttagaaatacctccacattaaatagagcagtaatgccagaaacaagtagaagg
ccttctgccaagagtattgacgctatttattcaggggtcccaaagcagatgctctttatc
ggcgcagtagttgcgggtgaggcactcctatctaattggcagggcaaaggagttaaattc
ttttggagcgatgcgatcgcgaaagcaatcgaaattgttgaatctaccggtaatgatttt
gaagttgtcagtagttcgctagcaccttggcatccaggtaggtgtgcagagataagagtt
ggcggaaagccaattgcgcatgcgggtgaattgcatccgagggtgatctcatcacttgat
cttccggagcgcacctgtgcttttgcagtgatcttaagtgaacttccaagtgctcaaacc
acaaaagcaccatcaatttggaaccaacccgcaactgtgcaagatattgcgttaatagtg
aataaggatgttgcagcggctgaagttgaaaaagcattgcgttccggtgcgggcaaccta
ctggagtcaattttattgtttgatagatacgatcaaattggtgagggtaaagtttcatta
gctttcacgctttcctttcgggcatcagatcgcaccctcacagctgatgaagtagctggc
tatcgggatgctgcagtagctgcggcagctaggtcctgtggggtggtattgcgttcttaa
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