Candidatus Nanopelagicus hibericus: B1s21160_03510
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Entry
B1s21160_03510 CDS
T05090
Name
(GenBank) RNase adapter protein RapZ
KO
K06958
RNase adapter protein RapZ
Organism
nhi
Candidatus Nanopelagicus hibericus
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhi03019
]
B1s21160_03510
Messenger RNA biogenesis [BR:
nhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B1s21160_03510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_18
NPHP3_N
AAA_22
nSTAND3
AAA_16
CoaE
ABC_tran
NB-ARC
APS_kinase
RsgA_GTPase
AAA_29
AAA_28
AAA
Motif
Other DBs
NCBI-ProteinID:
ASY13397
UniProt:
A0A249K9D3
LinkDB
All DBs
Position
complement(671532..672410)
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AA seq
292 aa
AA seq
DB search
MKSDTEILVISGMSGAGKSTIAHTLEDLGWYVVDNLPPALLENLIDLVNVSMKRIAIVID
VRGRAFFNDLTKSLALLADQGVSRKILFVDAADEVLVRRFESTRRPHPLQGSDRVLDGIA
KERERLREVKDSADLVIDSTSLNIHQLEKKINEYFTEDSNADLRVNILSFGYKYGIPIDA
DLVVDCRFIANPHWNPQLRPLTGLDKAVSSEILKSENVQDFLSKYQALFETMAIGFIGEG
RRYLTLAIGCTGGKHRSVAITEELVAKLTAGSKLSNYKIETKGLHRDLGREI
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgacaccgagatattggtaatcagcgggatgagtggcgcgggtaaatccacg
attgctcataccttggaagatctaggttggtatgttgtagataacttgccaccagcccta
cttgaaaatttgattgatctagtaaatgtctcgatgaaaagaatagcgatagtcatagat
gtaagggggagagcattttttaatgatctaactaaatcattggccctactggcggatcaa
ggtgtttcaagaaagatactatttgtagacgcggcagatgaggtgctagttcgccgattt
gaatcaactaggcggccacacccattacaaggatcagatcgagttcttgatgggatagcc
aaagaacgagagcgactgcgtgaagttaaggatagtgctgatctagtgattgattccacc
tcacttaatatccatcaacttgaaaaaaagattaatgagtattttactgaagattcaaat
gcagatttaagggtcaatatcctctcctttggctataagtatggaatccctattgatgca
gatttggttgttgattgtcgcttcattgcaaatccacattggaatcctcagctgcgccca
ctcaccggactcgataaggcggtaagtagtgagattttaaagagtgagaatgtgcaggat
tttttaagcaagtatcaagcgttgtttgaaactatggctattggatttataggagaaggt
agacggtatttaactttggccattggttgcactggtgggaaacatcgctccgtcgcaatc
accgaggagttggtagcgaaattaacggcaggttctaaactttctaattacaaaatagaa
actaaagggttacatcgagatttaggcagagagatataa
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