Candidatus Nanopelagicus hibericus: B1s21160_03935
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Entry
B1s21160_03935 CDS
T05090
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Pathway
nhi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
B1s21160_03935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhi03019
]
B1s21160_03935
03009 Ribosome biogenesis [BR:
nhi03009
]
B1s21160_03935
03036 Chromosome and associated proteins [BR:
nhi03036
]
B1s21160_03935
Enzymes [BR:
nhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
B1s21160_03935
Messenger RNA biogenesis [BR:
nhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B1s21160_03935
Ribosome biogenesis [BR:
nhi03009
]
Eukaryotic type
90S particles
RNase
B1s21160_03935
Prokaryotic type
rRNA processing factors
B1s21160_03935
Chromosome and associated proteins [BR:
nhi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
B1s21160_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ASY13471
UniProt:
A0A249K9L4
LinkDB
All DBs
Position
complement(764650..765336)
Genome browser
AA seq
228 aa
AA seq
DB search
MYSGLTERLGILVKDELLELALTHRSFSYEAGGIPTNERLEFLGDSVLGLVVTDELYKQF
PNLDESRLSPLRSGVVNMRALAQIARDLKLGEHLRIGKGEEATNGRDKNSILADSLEALV
GAIYIQHGYANTAQIVLEWIKPALTLASGMGASLDSKTALQELTSDLNLSTPEYEITESG
PDHDKSFIATVNIGSEKFPSGDGKSKREAEQAAAKLAYDLLSSRSKKK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ctgtactcaggcctaaccgagcgactcggaatcttggttaaggatgagttgctggaactt
gcattaacccaccgttctttttcttacgaagccggcggtattccgacaaatgaacgatta
gaatttttaggtgactcagtattaggactagttgtcaccgatgagctttataaacaattt
cccaatttagatgagagcagattaagtccacttagatctggtgtagtaaacatgagggca
ctagctcaaatagcacgcgacctaaaattaggtgagcatcttcgcatagggaaaggtgaa
gaggctacgaatggacgggataagaattcaattctggctgattcgctagaggcgttagtt
ggtgcaatttatattcagcacggctatgcaaatactgcacagatagttttagaatggata
aaaccagcacttactttggcatctggcatgggtgccagccttgatagtaaaactgctctt
caggagttgacctcagatttaaatttatcaacacctgagtatgaaattactgaatcagga
ccagatcacgataagagttttatcgccaccgtaaatatcggtagtgaaaagtttcctagt
ggtgacgggaaaagtaagcgtgaagccgagcaggcggcagcaaagcttgcatatgatctt
ttaagcagtagaagtaaaaagaaatag
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