Candidatus Nanopelagicus hibericus: B1s21160_04200
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Entry
B1s21160_04200 CDS
T05090
Name
(GenBank) endonuclease VIII
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nhi03009
]
B1s21160_04200
Enzymes [BR:
nhi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
B1s21160_04200
Ribosome biogenesis [BR:
nhi03009
]
Prokaryotic type
ribosomal protein modification factors
B1s21160_04200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Mur_ligase_C
CLP1_P
DUF3079
Motif
Other DBs
NCBI-ProteinID:
ASY13518
UniProt:
A0A249K9Q6
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All DBs
Position
complement(807706..809115)
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AA seq
469 aa
AA seq
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MSSKIINEKKLRTVALVTLGCARNETDSEELAGRLAADGWQLVSDPAKAEIAVINTCGFI
ENAKKDSIDALIQASSLKSNGVTKAVVAVGCMADRYGTELASEMSEADAILSFDDYKDIS
ARLHTIIEGGKVKTHTPRDRRALLPIAPIERANTRELSNIDVKPLGTVLRKRLDNAPIAP
LKIASGCDRRCSFCAIPYFRGSFISRKPDEIIEEAKWLADNGVSELYLVSENTTSYGKDF
GDLKMMEKLLPELSKISAIKRIRLSYLQPAEVRPSLLQAMVSVEKVVPYFDLSFQHANAD
LLRSMRRFGDGEKFLQLISQIRALNPQAGIRSNFIVGFPGESDQQFMELVEFLANAQLDA
IGVFGYSDEDKTEAMELGNKISGEVIKERVSELSTIVDELITERAQMRIGEKISVLIEDE
AEQEGRAEHQGPDVDGSTFIKSRNKFLVGEYVDAMVSDVAGVDLIAQVL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcaaaaataatcaatgaaaaaaagttgcgcacagttgcgttggttactttgggt
tgcgcccgtaatgagactgactctgaggagttagctggcaggttggctgctgatggctgg
caattggtttcagatccagcaaaggctgagatcgccgttattaatacctgtggatttatt
gaaaatgcaaagaaggactcaattgatgcattaattcaagcttcatctcttaagagtaat
ggggtgacaaaggcggtggttgcagttggttgtatggctgataggtatggtactgagttg
gcaagtgagatgtctgaggccgatgcaattcttagctttgatgattacaaagatatctct
gccagattacatacaattattgagggcggtaaggtaaaaacgcacacccccagagatcgc
agagctttactgccaatagcaccgatcgaacgtgctaatactcgagagctatcaaatata
gatgtaaaacctttgggcacagttctgcgcaagcggctagataatgcacccattgcgcca
ttgaagatcgccagtggttgtgatcgcagatgctcattttgtgccatcccttactttcgt
ggttcatttatttcccgcaagccagatgagattattgaagaggccaaatggttggcagat
aatggcgtttcagagttatatctagttagtgagaacaccacctcctacggcaaggatttt
ggtgatctaaagatgatggaaaagttgctgcctgagctatcaaaaatatcggcaattaag
cggatccgcttgtcttatctacaacctgcagaggttaggccatcattactgcaggcaatg
gtttcagtagaaaaggtagttccttacttcgacctatcctttcaacatgcaaatgcagat
ttgctaagaagcatgcgccgatttggtgatggtgagaaatttctgcaattaatttcacaa
attagggcgctcaatccgcaggctggaattagatctaattttattgtgggatttccgggg
gagagtgatcagcaatttatggagttggtggagtttttagccaacgctcaattagatgca
attggtgtctttggctactccgatgaggataagacagaggcaatggagttgggaaataag
ataagtggtgaggtaattaaagaacgggtgagtgagttatcaaccatagttgatgagtta
attactgaacgcgcccagatgcgaatcggtgagaagatttcagttctgattgaggatgag
gcggagcaggagggtagggctgagcatcaaggacctgatgtagatggttcaacttttatt
aaatcccgtaacaagtttctagtaggtgagtatgttgatgccatggttagtgatgtggca
ggggttgatctgatagcgcaggttttatga
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