Candidatus Nanopelagicus hibericus: B1s21160_04890
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Entry
B1s21160_04890 CDS
T05090
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Pathway
nhi00260
Glycine, serine and threonine metabolism
nhi00630
Glyoxylate and dicarboxylate metabolism
nhi00670
One carbon pool by folate
nhi00680
Methane metabolism
nhi01100
Metabolic pathways
nhi01110
Biosynthesis of secondary metabolites
nhi01120
Microbial metabolism in diverse environments
nhi01200
Carbon metabolism
nhi01230
Biosynthesis of amino acids
nhi01240
Biosynthesis of cofactors
nhi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
B1s21160_04890
09102 Energy metabolism
00680 Methane metabolism
B1s21160_04890
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
B1s21160_04890
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
B1s21160_04890
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
B1s21160_04890
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
B1s21160_04890
Enzymes [BR:
nhi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
B1s21160_04890
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
ASY13646
UniProt:
A0A249KA70
LinkDB
All DBs
Position
complement(949233..950513)
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AA seq
426 aa
AA seq
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MSRFEKYYGPDFNSLEKQDPEIAAVVISELVRQRQDVQLIASENFTSSAVLAAMGSTLSN
KYAEGYPGKRYYGGCEEVDKVEIIGIDRAKKLFGAEHANLQPHSGASANVAVYQAFTKPG
DTVLAMSLPHGGHLTHGSKVNFSGKWFNVVSYGVRQDNELIDYDQLRDLAIEHKPKMICS
GATAYPSLIDFQKVRQICDEVGAIMWVDAAHFIGLVAGKAIPSPVPYADVVSFTTHKVLR
GPRGGMILSKEKHAAAIDKAIFPGMQGGPIMSAVAGKAIVLKECATAEYQSYAKKVIENC
QELAKSLENEGMRAVSGGTQTHLALIDIRSTGVTGKVADERCGLSGITLNKNAIPYDPQT
PAVTSGIRVGTAATTTQGMGKNEMKQIASFIARAIKDGEDAGKAKAIRSEVHQLTNQFPV
YPEPKN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctttgaaaaatactacggcccagattttaattcactagaaaaacaagatcca
gagatagccgctgttgtaatttcagagcttgtgcgccaacgccaagatgtgcaattaatc
gcaagtgaaaatttcacctcatcagctgtcctagctgcaatgggctcaacactttcaaat
aaatatgctgaaggttatccaggcaagcgatactacggcggctgcgaagaggtggataag
gttgaaataattggtattgatcgtgctaaaaaactatttggcgcagagcacgcaaatctt
caaccacattctggggcaagtgcaaacgttgctgtttatcaggcatttactaagccaggt
gacacagttctggcaatgtcgctgccacatggcggacatttaactcatggttctaaagtg
aatttttcaggtaagtggttcaatgttgtttcctacggcgttcgtcaagataatgaatta
attgattatgatcaattgcgagatcttgcgattgagcacaaacctaagatgatttgctca
ggtgctactgcatatccaagtttgattgacttccaaaaagttcgtcaaatatgtgatgag
gttggcgcaattatgtgggtggatgcagctcactttattggcttagttgctggcaaggcg
attccatctcctgtgccgtatgcggatgtagtttcgtttacaactcacaaagtgctgcgc
ggtccaaggggtggcatgattttgtcgaaagaaaagcatgcagctgctattgataaagca
atatttccaggcatgcaaggtgggcccattatgagtgcggttgctggcaaggcaatcgtt
ttaaaagagtgtgcaactgctgagtatcaaagttatgctaaaaaagttattgagaattgc
caagagctggctaagagtttagagaacgaaggaatgcgtgcagtatctggtggcactcaa
actcaccttgccttaattgatattcgctcgaccggtgtaacaggcaaggttgctgatgaa
agatgtgggctttctggtattactctcaataaaaatgccattccatatgatccacaaacc
ccagcagttaccagcggcataagggttggaactgcggcaacaacaactcagggtatgggt
aaaaatgagatgaaacagattgcatcatttattgcgcgggcgataaaagatggtgaagat
gcgggtaaggctaaggcaattagatctgaggttcatcaattaactaatcaattcccggtc
tatcctgaaccaaagaattaa
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