Candidatus Nanopelagicus hibericus: B1s21160_05495
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Entry
B1s21160_05495 CDS
T05090
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Pathway
nhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1s21160_05495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhi03019
]
B1s21160_05495
03110 Chaperones and folding catalysts [BR:
nhi03110
]
B1s21160_05495
03029 Mitochondrial biogenesis [BR:
nhi03029
]
B1s21160_05495
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nhi04147
]
B1s21160_05495
Enzymes [BR:
nhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
B1s21160_05495
Messenger RNA biogenesis [BR:
nhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
B1s21160_05495
Chaperones and folding catalysts [BR:
nhi03110
]
Heat shock proteins
HSP60 / Chaperonin
B1s21160_05495
Mitochondrial biogenesis [BR:
nhi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
B1s21160_05495
Exosome [BR:
nhi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
B1s21160_05495
Exosomal proteins of other body fluids (saliva and urine)
B1s21160_05495
Exosomal proteins of breast cancer cells
B1s21160_05495
Exosomal proteins of colorectal cancer cells
B1s21160_05495
Exosomal proteins of bladder cancer cells
B1s21160_05495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
DUF5021
Motif
Other DBs
NCBI-ProteinID:
ASY13753
UniProt:
A0A249KAB9
LinkDB
All DBs
Position
complement(1076281..1077906)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKMIAFNEEARRGLERGMNVLADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPWEKIGADLVKEVAKKTDDVAGDGTTTATVLAQAMVREGLRNVAAGSNPMSLKRGIE
KAVEAISTELLKMAKPVETKEQISATASISAADSTIGEMIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFVTDTERMETVMEDAYILIANAKITNIKDLVPILEKVMQ
TGKPLMIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDIAILTGATVIS
EEVGLKLDQTTVELLGTARKVVIAKEETTIVEGGGDADQIKGRVNQIRSEIEKSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SKVAFAKLKLSGDEATGGKIVEYAVESPLKQIAINAGLEGGVVVEKVRGLEAGFGLDAAT
GEYVDMIKSGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEPKPAAPMPGGDGGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatgattgccttcaatgaagaggctcgtcgcggcttagagcgcggcatgaat
gtattagcagatgcggtcaaggtgacccttgggccccgtggtcgcaacgttgtgctggag
aaaaaatggggagcgccaactattaccaatgatggtgtctcaattgccaaggagattgaa
ttagatgatccatgggagaagattggtgcagatttagttaaagaggttgcaaagaagact
gatgatgttgccggtgatggcaccacaactgccacagttttagcacaagcaatggtgcgc
gagggacttcgaaatgttgcagccggatcaaatcccatgtcattaaagcgtggaattgaa
aaagcggtcgaggcaatctcaacagagttattaaagatggcaaagccagttgaaactaaa
gagcagatctcagccaccgcttcgatctcagctgctgactccacaatcggtgagatgatc
gcagaggcgatggataaggttggtaaagagggtgtaattaccgttgaagagagcaataca
tttggtctggagttagagctgactgagggtatgcgatttgataagggttatatctctgct
tactttgtcactgacaccgaacgtatggaaacagttatggaagatgcttacattctaatt
gccaatgccaagattacaaatatcaaggatctagtaccaatccttgagaaggtaatgcaa
accggcaagccactgatgattattgccgaagatgttgaaggtgaagcactttcaaccttg
gtagtaaataagattcggggcacatttaaatctgttgcagttaaagcccctggttttggt
gaccgtcgcaaggcaatgctgcaagatattgcaatattaactggcgctaccgtaatctca
gaggaggtcggattaaagcttgatcaaaccaccgttgaattacttggcaccgcccgtaag
gttgttattgccaaagaagagacaacaattgttgaaggcggcggagatgcagatcaaatt
aagggtcgggttaatcagatccgaagtgagattgaaaagagtgactctgattatgaccgc
gagaaattacaggagcggttggcaaaacttgctggtggtgtagcggtaattaaggcaggg
gctgctactgaggttgaacttaaagagcgcaagcaccgaattgaagatgcagttcgcaac
gctaaggcagcggtagaagagggaattgttgctggtggtggcgtggcattacttcaggca
tcaaaggttgcctttgcaaaattaaagctaagtggcgatgaagcaactggtggcaaaatt
gttgagtacgcagttgaatcaccacttaagcagattgcaattaatgctggccttgagggt
ggcgtagttgtagaaaaggttcgtggcttagaggcagggtttggtttagatgctgccact
ggtgagtatgttgacatgatcaagagtggaattattgatccagcaaaagtaactagatca
gcgctacaaaatgcagcatctattgcagctttgttcttaacaactgaggcggtaattgca
gataaaccagagccaaagccagcagcaccaatgccaggtggcgacggcggcggaatggat
ttctaa
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