KEGG   Nitrosococcus halophilus: Nhal_0330
Entry
Nhal_0330         CDS       T01198                                 
Name
(GenBank) conserved hypothetical protein
  KO
K06958  RNase adapter protein RapZ
Organism
nhl  Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:nhl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nhl03019]
    Nhal_0330
Messenger RNA biogenesis [BR:nhl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Nhal_0330
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_33 AAA_22 AAA_18 AAA_16 AAA_30 DUF7776 LRRCT_2 Integrase_1
Other DBs
NCBI-ProteinID: ADE13526
UniProt: D5BUX6
LinkDB
Position
complement(326942..327790)
AA seq 282 aa
MKLLIISGVSGSGKSIALHALEDQGFYCIDNLPVYLLPVFAQKMQQDDAQQLRAAVGIDA
RNLPQELQQFPQILEDIENVGAHCHIIFLDASDATLLKRFSETRRKHPLNNIPLAEAIRH
ERELLEAIAEKADLRIDTTCTTVHQLRDLISERVGDGARTGMSLLFQSFGYKHGVPLDAD
FVFDVRCLPNPYWEPHLRPLSGRDQEVIAYLERHEAVAQMRQDLITFLQHWLQRFQETNR
SYLTVAIGCTGGQHRSVYLTEQLTAHFHSAHSRVLCRHRELS
NT seq 849 nt   +upstreamnt  +downstreamnt
atgaaattgctaatcatcagcggtgtatcgggatcaggcaaaagtattgcccttcatgcc
ttagaagatcagggtttctattgcattgataatctgcctgtctaccttcttcccgtcttt
gcccaaaagatgcaacaggatgatgcccagcaactccgcgccgccgtcggtatcgatgcc
cgcaaccttccccaagaactacaacaatttccccagatcctagaggacattgaaaatgtg
ggggctcactgccatatcatctttcttgatgccagtgacgccacccttcttaaacgcttt
agtgaaacccgccgcaaacacccactcaacaatattcctctcgccgaggccatccgccat
gagcgggagttattagaggccattgccgaaaaagccgatcttaggattgataccacctgc
accacggtccaccagctacgggatttaatcagcgaacgggtcggcgatggtgcgcgtacg
ggaatgtcactgctatttcaatcctttggctacaaacatggcgtccccctcgacgctgac
tttgtatttgacgtccgctgtcttcctaacccctattgggaaccccatttacgtccctta
agcgggcgtgaccaagaagtgattgcctatcttgagcgccacgaggccgtcgcccaaatg
cggcaagacttgattaccttcttacagcactggctgcaacggtttcaagagaccaatcgc
agctatctgacggtggccatcggatgcacagggggacagcatcgttcagtttatttaaca
gagcagctcacagcccatttccattccgcccatagccgagtactttgccgccatcgggaa
ttgtcatga

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