Nitrosococcus halophilus: Nhal_0539
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Entry
Nhal_0539 CDS
T01198
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nhl
Nitrosococcus halophilus
Pathway
nhl03030
DNA replication
nhl03430
Mismatch repair
nhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nhal_0539
03430 Mismatch repair
Nhal_0539
03440 Homologous recombination
Nhal_0539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhl03032
]
Nhal_0539
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_0539
Enzymes [BR:
nhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nhal_0539
DNA replication proteins [BR:
nhl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nhal_0539
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nhal_0539
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
HP_1247_M
DNA_pol3_gamma3
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ADE13723
UniProt:
D5BW73
LinkDB
All DBs
Position
553050..554105
Genome browser
AA seq
351 aa
AA seq
DB search
MRVKLEQLAAHLERKIAPIYLLFGDEPLLIEEAADLIRAQARSQGFNEREVMHVDRGFDW
GQLQLATESLSLFASRRLLELRLSGGGVGEPGAKALQAYGKDPSRDTLLLIISNKLERRH
QGSSWFSLLEQAGVVVQVFKVDPSLLPRWIERRMQSKNLHPTPEAVTALAERLEGNLLAC
AQEIDKLALLCPEGTIDIHGVEEVVADSARYDAFRLVESALAGDVVRISRIWRGLRAEGV
DPSVVLGALAWELRRLVRVATACAQGTPVDQALREERVWERRKALSKQALSRHAAYRWRI
FLQRLSDIDRMIKGAAKGRPWEAILQLCIAIAGVELFPPCRGNLGYELDRA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagagttaagctagaacagctcgccgcccatctggagcgtaaaattgctcccatttac
ttgctcttcggcgatgaaccgctgctaatagaagaagcggctgatctgattcgtgcccaa
gcccgctctcaaggctttaatgagcgggaggtgatgcatgttgaccgtgggtttgactgg
gggcaattgcaactggccaccgaaagtctctctttgttcgcctcccgtcgccttcttgag
ttacgcttgtcgggcgggggcgttggggagcctggagctaaagcgttgcaagcttatggg
aaagacccaagccgggacacccttttgctgatcattagtaataaattggagcgccggcac
caggggagttcatggttttccctgcttgagcaagcgggggttgtggtccaggtgtttaaa
gtcgatccctctttgctgccccggtggattgagcgccggatgcagagcaaaaacctgcat
cctacgccggaggccgtaaccgcgttggcggagcgcttggaaggcaatctgctcgcttgt
gcccaagagattgataagttggccttgttgtgtccggaagggaccatcgatatccatggg
gtagaggaggtcgttgccgacagtgcccgttatgatgcatttcgccttgtagagagtgcg
ttagcaggcgatgtggttcggatatcacggatctggcgtgggctgcgtgccgaaggtgtg
gatccctctgtggttttgggggccttggcttgggaactgcggcgattggttcgtgtcgcc
actgcttgcgcccagggaaccccggtagatcaggccttgagagaggagcgagtatgggag
cgacgcaaggccctgagcaagcaggccctgtcccgccatgcagcgtaccgttggcggatt
ttcctacagcgattgagcgacatcgaccggatgattaagggcgcggcgaagggccgtccg
tgggaggcaattctgcaattatgtatcgctattgcaggagttgagctcttccctccgtgc
cggggaaacttgggctatgagctagacagggcataa
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