Nitrosococcus halophilus: Nhal_1957
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Entry
Nhal_1957 CDS
T01198
Name
(GenBank) Formamidopyrimidine-DNA glycosylase catalytic domain protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nhl
Nitrosococcus halophilus
Pathway
nhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nhal_1957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_1957
Enzymes [BR:
nhl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Nhal_1957
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Nhal_1957
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Nhal_1957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
DUF5754
Motif
Other DBs
NCBI-ProteinID:
ADE15065
UniProt:
D5C3U3
LinkDB
All DBs
Position
complement(2020337..2020669)
Genome browser
AA seq
110 aa
AA seq
DB search
MPELPDVETFKRYLDATALHQTIDSVSVKATVLLKDLSIRHLQHCLEKRQLKETQRHGKY
LFVSLDDGDWLVLHFGMTGYLQYFKHRKDSPPDTGLLIGFQNGYYLNFKN
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacccgatgttgaaaccttcaaacgctatcttgatgccacggccctgcac
caaactattgatagtgtatccgtcaaagcaaccgttctccttaaggatctctcgatacgc
cacctacaacattgcttagaaaagcggcaattgaaggagacccaacgccatgggaaatac
ctttttgtcagcttagacgatggcgattggctagtattgcatttcggcatgaccggctac
ctccaatattttaagcaccgcaaagactccccccctgacacgggcttactcattggcttc
caaaatggctattaccttaattttaaaaattaa
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