Nitrosococcus halophilus: Nhal_1979
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Entry
Nhal_1979 CDS
T01198
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nhl
Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_1979
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Nhal_1979
Archaeal homologous recombinant proteins
Nhal_1979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
Chorion_S16
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ADE15087
UniProt:
D5C3W5
LinkDB
All DBs
Position
2044026..2047685
Genome browser
AA seq
1219 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTVPEFAANGLFAITGPTGAGKSSLLDAICLALYHQTPR
LKVSGESNELMTRHTGEALAEVEFEVKGEAYRAFWSQRRARYKSEGKLQSPQVELAKADG
TIIADKIGEKLHLISELTGLDFGRFTKSMLLAQGGFAAFLNAVPNERAELLEELTGTEIY
GEISRRVYERKRQEEVRFNVLKARVEGVELLEEETLTTLRREQHTLEEKEKTLKQDLQQL
TQQKQWLEKIEEAETQQAQARSHWQRVQEKIKAQQGALQKLEQALPALKLRPHYLEVQAS
QKALAEAEHNREVEQQQAAEKDRALAAIKQHVQQQQTWFAQQREAWEKTENLLNEQVVPL
DNQIAELHREKNKLCSRIKETSDRQVALDEQAQKLQQQQAQTQRALKTAIEYLQAHASQE
KLGEQLPLWWEQFERRQQLFQQQQQLQAALETQQEEILKSDARIQQQTEAIKQGEQALKA
LEAQYQKTLADKNRILNHTPETQWRERQQQLMEAAPQRFKLTTLHSQYQERQERQREQAA
ALVESQQKLKTQQTALEGTQRCYRREQQCLNDLHRVLELEQRIVSLEQHRDQLQEGEACP
LCGSKEHPAVAAYQEIDLSATQQRQQQQEQQLESLRAQEEQQKAAVIQWENECRHLEQAL
KEGHQVLENLHGEWTQTTAPLGVSLSLHHPQEIVRWLAQREQEAVQIKQLIGQLDDFDQQ
LREQKEALIQARQSLSDVQHQQALAEQQKTAQMKSCQEQQQHLEERQKEFQELENKLSGT
LGELPALDTQTQWLARQQGLWQAYQGMAQQRQERQTELTQFQMEQTQLEREQNQNQKEKN
QLSEQLSQMETQLAQYTKQRHQLLGNRTVTEERSRGREALATAEQALSQSKQQQERAQAE
MNQLQGALETLKHTIQTQQTHYQKARQEWQAALQASHFPDQESFEQALLPPEEYDRLTQL
KEQLNRESSQAEALYQKAEKTLQLLRQTPLTPQPLAQVRENLEERQQQLHQLMKRQGEIK
QTLTADRERREAQKKNFMEIERQQETYDLWTQLSSLIGSQKGDKFRRFAQGLTLDHLVYL
ANRQLERLHGRYLLNRKAGEELALEVVDTWQADVVRDTKTLSGGESFLVSLALALALSDL
VSHKTSIDSLFLDEGFGTLDGETLETALDALDHLNASGKMIGVISHIEALKERIPTQINV
KKGNGLGYSTLDKRFAVIG
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgagcctgcggttgaaaaatattaattctctcaaaggggaatggaaaatc
gatttcacggtaccggaatttgccgccaacggcctctttgctattaccggaccgacgggg
gcagggaaatccagcctgttggatgctatttgcttggccctttatcatcaaaccccccgc
cttaaggtatcaggagaaagtaatgaactgatgacccgccatacgggggaagccctcgcc
gaagtggaatttgaagtcaagggggaagcctatcgggctttttggagccagcgccgggcc
cgctataaatcggaaggcaaattgcaatctccccaagtggagttggccaaagccgacggg
accattattgccgataaaatcggggaaaagcttcatctcatcagcgagcttacgggattg
gattttggccgcttcaccaaatccatgttgctcgcccaggggggctttgccgcctttctc
aacgctgttcccaatgagcgggcggaacttttggaagaacttaccggcaccgagatctat
ggtgaaatttcccgccgggtttatgagcgtaagcgtcaggaggaagtgcggtttaatgtg
ctaaaagcccgggtcgagggggtggaactactagaggaggaaaccttaactaccctaagg
cgggagcaacacaccctcgaggagaaggaaaaaacactgaagcaagatttgcagcaattg
actcagcaaaaacaatggctagagaaaatagaagaggcagaaacccaacaggcccaagcc
cggagccattggcaaagggtgcaggagaagatcaaagcccagcaaggggcattgcaaaag
ttggagcaggcactgccggccctgaagctaagacctcactacttggaagtgcaagccagc
caaaaagccttggcggaagcagagcataaccgggaagttgaacaacaacaggcggcagaa
aaggacagagcactggctgcaattaaacaacacgtccagcaacaacagacctggtttgca
caacagcgggaggcatgggaaaaaacggaaaacttgctcaatgaacaggtggtgcccctg
gataaccagattgcagagcttcaccgggagaagaataaactttgctctagaataaaagaa
acctcggaccggcaagtagccctggatgaacaagcccaaaaactccagcaacaacaggcc
caaacccaaagggctttaaaaacggcgatagaatatttgcaagcccacgcctcccaggag
aaattgggagaacagctccccttatggtgggaacaattcgagcgccggcagcagttgttt
caacaacagcaacaacttcaagccgcccttgaaacacagcaagaagaaattttaaaaagt
gatgcccgtatccaacaacagaccgaagcgataaaacaaggagaacaagccttaaaagcc
ctagaagctcaataccaaaaaaccttggcggataaaaacaggatcttaaatcatactccc
gaaacccagtggcgggagcgtcagcaacaattgatggaggccgccccccaacgtttcaag
ctcaccacccttcactcccaataccaggaaagacaagaacgccaaagagagcaggcagcc
gccttggttgagagtcagcagaaactaaagactcagcaaacggccttggaaggaacacaa
cggtgttatcgccgggaacaacaatgtctcaatgatttgcatcgcgtgctggaactggaa
caacgcattgtgagcctagagcagcaccgggaccaattacaagaaggggaagcctgtccc
ctatgcggctccaaagaacatccagcagtggcggcctatcaggagatcgatctttccgct
actcaacagcgccagcagcaacaggaacaacaattggaatccctgcgtgcccaagaggaa
cagcaaaaggccgccgttatacagtgggaaaatgaatgccgccatttggaacaggcttta
aaggaaggtcatcaggtactggaaaatctacacggagaatggacgcaaaccaccgccccg
ttgggagtctctctgagcctccaccatccccaggaaattgtccgttggttagcacagagg
gagcaggaagcggtgcagattaagcaactgatcggccagctcgatgattttgatcagcaa
ttgagggagcaaaaggaggcccttatccaggcccgccaatccctttccgatgtccaacac
cagcaggctttagccgagcaacaaaaaaccgctcagatgaaatcttgccaagaacagcag
cagcatctagaggagagacaaaaagaattccaagaactggaaaataaactgtccggcact
ttgggagagctgcctgccttggacactcaaacccaatggctagcgcggcagcaagggtta
tggcaggcctatcaggggatggcgcaacaacggcaggagcggcaaaccgagctgactcaa
tttcaaatggaacaaacccaactggaacgggagcaaaaccagaatcagaaagaaaaaaat
caattgtcggaacaactcagtcagatggagacccagcttgcccaatacaccaagcaacgt
caccaattattgggcaatcgcaccgtgacggaagaaagaagccgagggcgtgaagcccta
gcaactgccgaacaagcgctgtcccagagcaagcagcagcaagaaagggcacaggctgag
atgaatcaattacagggagcgcttgaaaccctcaaacacactattcaaacccaacagacc
cactaccagaaagcgcggcaggaatggcaggcggccttgcaggcaagccactttcccgat
caggaaagtttcgagcaggccctgttgccgccggaggaatatgatcgactcacacaactc
aaagaacaactcaaccgggaatccagccaagctgaagccttatatcagaaagcggaaaaa
acactccagctattacgccaaacgccgcttaccccgcaaccgctggctcaggtccgggaa
aatttggaggagcgccaacagcagttgcaccaattgatgaagcgccagggggagatcaaa
caaaccttaaccgctgatcgggaacgacgggaggcgcagaaaaaaaatttcatggagatt
gagcgacagcaagagacctatgatctctggactcagttaagcagtttgattggctcccaa
aaaggagataaattccgccgctttgcccagggattgaccctggaccacttggtgtatctg
gctaatcgccaactggaacggctacatggccgctatttgctgaaccgtaaagcgggcgaa
gaactggccttggaggtggtggatacttggcaagcggatgtggtgcgggacaccaagacc
ttatccgggggggaaagctttctggtgagtctggccttggccttggctctctcggatctg
gtcagtcataaaaccagtattgattctttattcctggacgagggttttggcaccttggat
ggggaaaccctggaaacggccttagatgctttggaccacctgaacgccagtggcaagatg
attggggtgatctcccacattgaggcccttaaagagcgtattcccacccagattaatgtg
aaaaaaggaaacggcttaggctatagcacactggataaacgttttgctgtaattgggtga
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integrated database retrieval system
