KEGG   Nitrosococcus halophilus: Nhal_1987
Entry
Nhal_1987         CDS       T01198                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
nhl  Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:nhl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nhl02048]
    Nhal_1987
Enzymes [BR:nhl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Nhal_1987
Prokaryotic defense system [BR:nhl02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Nhal_1987
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N DUF559 T1RH-like_C ResIII T1R_D3-like MTES_1575 DEAD
Other DBs
NCBI-ProteinID: ADE15095
UniProt: D5C3X3
LinkDB
Position
2054324..2058133
AA seq 1269 aa
MPSFLSEDNIEQAMVQRLQHLYGYDVLDCYTSDAADLNDGSQRADKREVILRDRLKAAAV
RLNPEIPEAAIDDAVDQVCDRRQAMATMVANRELDSLIRDGVRVEFKDKQNNHGRTRKER
IKLIDFDTPENNHFLAATQLWIQSTGAAAKAGYRRPDILLYINGLPLVFIELKNSNVKLR
SAYDDNLTHYKADIPQLFLTNVFCVFSNGLETRLGSLSAEWEHFFHWLRPEDEKEKIRRD
QIREQGTSAERFLQGLAAKDKLLDYVENFVIYHKGSQKIIAQNHQFLGVNRAFRVFVERR
GWLEQQKGLADKEPLTPALSQGEREKTGAHYRAGYDFSGLVTRARELRQQQTPAEDVLWQ
LLRNRQFLGLKFRRQHQLGDFIADFYCDEHKLVVEVDGSIHATVEKTQHDRTRQLILEGQ
GFQVIQLSNELILNNPEAALESIAAKLPLPDESAADERTTPNKPQPQNRPSPSGRGAGGE
GKTPFKANRLGVFWHTQGSGKSFSMIFYARKIIRKVPGNYSFVVVTDREDLDGQIYRNFL
NTETVKKADAAQPKNSEQMRAFLGQNKKLVFTLIQKFRWPKGKRYPVLSERDDIIVIVDE
AHRTQYKSLAENMRAGLPHAQYLAFTGTPLLGRERKTNEWFGDYVSEYNFSQSMDDGATV
PLFYKKRVPEVLNQNEELSDEFYEILEDENLDEAQQEKLERRFATELQVIKRDDRLETIA
RDLVYHFPRRGYLGKGMLIAVDKFTAVKMYDKVQRLWKEDIKSLRGEIKKSVDEVHKARL
QRQLDWMRKVEMAVVVSAENGEEEKFDAQGLDIRPHRKRMDQLDAHGHDLEYNYKDPEHP
LQLVFVCAMWLTGFDAPTVSTLYLDKPQKDHTLMQTIARANRVSSHRINGVEKTNGEIVD
YYGVIGRLRKAIKDYGQGGDGLDEPPVKDKDELFCLLADALEQARLFCAEREIVIDTALA
ADDVFKQVSLFEEWADTLLSKDEWRQSFKVLENTITALYEACKPEILGDPVVRKVALFQY
LRGVLDSIIQQQDIDLATKKINELLDESLIVDDQKFSQVKEESGGWKIEQKGQTWDLSKI
DFDKLKEDFKQAKYKNIEIADLRAFLEKKLQDMLNKNRTRRDFAERLQEIIDNYNAGSNS
ADSDFTELVKFAESLKQEEDRHIREGLSEDELEIYDLLCKENMTKAEEKKVRLAARALLK
RLTEEKPKVLVQDWYKDSQTRLAVRDEVGAVLDEYLPEDSYDKELFLLKRDRVFELTLDL
AINHQRWAA
NT seq 3810 nt   +upstreamnt  +downstreamnt
atgcctagcttcctgtctgaagacaacatcgaacaggccatggtgcagcgtttgcagcat
ctgtatggctacgatgtgctggattgctacaccagtgatgcggcggatctgaatgacggc
tcacagcgcgcggacaagcgcgaggtgattttgcgtgatcgtctgaaagccgcagcggtg
cgcctcaatccggagattcccgaagccgccattgacgatgcggtggaccaggtatgcgac
cgacgccaggccatggccaccatggtggccaaccgcgagctggacagcctgatccgcgac
ggagtgcgggtggagttcaaggataagcagaataaccatggccgcacccgcaaggagcgg
ataaagctgattgactttgatacgcctgaaaacaaccactttctcgccgccacccagcta
tggattcaaagcaccggcgcggcggccaaggcgggctatcgccgaccggatattctgctc
tatatcaacggcctgccgctggtattcattgagctgaagaattccaacgtcaaactgcgc
agcgcctacgacgacaacctgacccactacaaagccgacattccccagttgttcctgacc
aatgtgttttgtgtgttcagcaacggtctcgaaacgcgcctgggcagcttgagcgccgag
tgggagcactttttccattggttgcgccccgaggacgagaaggaaaagatacgccgggac
cagattcgcgagcaaggcaccagtgccgaacgcttcctgcagggcctggctgccaaagac
aagctgctggattatgtggaaaacttcgtcatctaccacaagggttcgcagaaaatcatt
gcccagaaccaccagttccttggcgttaatcgggctttcagggtatttgttgagcggcga
gggtggcttgaacagcagaagggtttagcagacaaggaacccctcaccccggccctctcc
cagggggagagggagaaaacaggcgctcactatcgggcagggtatgacttttcgggtctg
gtaactcgtgcccgggaactccgtcaacaacagacacctgctgaggacgttctatggcag
ttgctgagaaaccggcaattcctcggcctgaaatttcgcagacagcatcagcttggagat
ttcattgccgatttctactgcgatgagcacaagctggttgttgaagtggacggcagtatc
catgcaacggtagaaaaaacacagcatgacagaactcgtcaattgatactcgaagggcag
ggtttccaggttatccaactctccaacgaattaatcctcaataatcccgaagcagcactt
gaatcaatcgccgcaaagctcccccttcctgatgaaagcgcggccgacgagcgcacgacg
ccgaacaaaccccaaccgcaaaaccgcccctctccctctgggagaggggctgggggtgag
ggtaagacgccgttcaaggccaacaggctgggcgtcttttggcatacccagggctcgggc
aagagtttttccatgatcttttatgcgcgcaagatcatccgcaaggtgccgggcaattac
agctttgtggtggtgaccgaccgcgaagatctggacgggcagatttaccgcaacttcctc
aataccgaaaccgtcaagaaagccgatgccgcccagcccaaaaacagcgagcagatgcgc
gcctttctcggccagaacaagaagctggtgtttaccctgattcagaagttccgctggccc
aagggcaagcgctacccggtgctgtctgagcgcgacgacattattgtgattgtggatgag
gcccaccgcacccagtacaaatccctggcggaaaacatgcgcgcgggtctgccccatgcc
cagtatctggccttcaccggcacgcccctgctggggcgcgagcgcaagaccaacgaatgg
tttggcgattatgtatcggaatacaacttcagccagtccatggacgacggcgccaccgta
ccgctgttctacaaaaaacgcgtgccggaggtcttgaaccagaacgaggaactaagcgac
gagttttacgagattctggaggacgaaaacctcgacgaagcgcagcaggaaaagctggag
cgtcgttttgccacggaactgcaagtgatcaaacgcgatgaccggctggagaccatcgcc
cgggatctggtctaccacttcccgcgccgtggttatcttggcaagggcatgctgatcgcc
gtggacaagttcaccgccgtgaagatgtacgacaaggtacaacggctgtggaaagaggac
atcaaatcgctgcgcggggagatcaagaaaagcgtagacgaggtgcacaaggcgcgcttg
cagaggcagctcgactggatgcgcaaggtggaaatggcggtggtggtcagtgccgagaac
ggcgaggaagaaaaattcgacgcccagggcctggacatccgcccgcatcgcaaacgcatg
gatcaactggacgcccacggccacgatctggaatacaactacaaagacccggagcacccg
ctgcaactggtgttcgtgtgcgccatgtggttgaccggatttgatgcgccgacagtctca
acgctctacctcgacaagccacagaaagatcatactctgatgcaaaccattgcccgtgcc
aaccgggtgagctcgcatcgcatcaacggtgtggagaagaccaacggcgaaatcgtcgat
tattacggcgtgatcggccgcctcaggaaagcaatcaaggattacggccagggtggtgac
gggctagatgaaccaccagtcaaggataaggacgagctgttttgcttgctggccgatgcc
cttgagcaggcgcgcctcttctgtgccgagcgcgagattgttatcgacacggcgttggca
gcagacgatgtgttcaagcaggtcagcctgtttgaagaatgggcagacaccttgctctcg
aaagatgaatggcggcaatccttcaaggtgttagagaatactattaccgcgctttatgaa
gcctgcaagccggagattctgggcgatccggtcgtgcgcaaggtggctttatttcaatat
ctacgcggcgtgcttgacagcattattcagcagcaggacattgatcttgctaccaaaaaa
attaacgagttgctcgatgaaagcctgattgtggatgatcagaaattcagccaggtcaaa
gaggagtcgggcggatggaagattgaacagaaaggccagacatgggatctgagcaaaatc
gacttcgacaaactgaaagaagacttcaaacaggccaagtacaaaaacatcgaaattgcc
gacttgcgcgcctttctggaaaagaaactgcaggacatgctcaataaaaaccgcacccga
cgagattttgccgaacggctacaggaaatcatcgacaactataacgcgggcagtaattct
gcggacagtgactttaccgagctggttaaattcgccgaatcactcaagcaagaagaagat
cgacatatccgtgaaggtttgagcgaggacgagctggaaatctacgatttgttatgtaag
gaaaacatgaccaaggcggaggaaaagaaagtgcgtttggcagccagagccttattgaaa
cgcttgaccgaagaaaagccaaaagtgttggtgcaggactggtacaaagacagccagaca
cggcttgctgtgcgcgatgaagtgggtgcggtactggatgagtaccttcccgaagacagc
tatgacaaagagctgttcttactcaagcgtgacagggtgtttgagctgacgcttgatctg
gcgatcaaccaccagcgctgggcggcatag

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