Nitrosococcus halophilus: Nhal_2201
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Entry
Nhal_2201 CDS
T01198
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
nhl
Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhl03021
]
Nhal_2201
Transcription machinery [BR:
nhl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Nhal_2201
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_25
Sigma70_r1_2
UCR_14kD
TnsD
2Fe-2S_thioredx
DUF7620
Motif
Other DBs
NCBI-ProteinID:
ADE15292
UniProt:
D5C569
LinkDB
All DBs
Position
complement(2278170..2279033)
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AA seq
287 aa
AA seq
DB search
MELTVRNSNGFLVPVAVGDLDTYCQTVHSIPILSADQEHNLALRLRDHHDLDAARQLVLS
HLRFVVRIARGYSGYGLPLADLIQEGNIGLMKAVKRFDPEQGVRLVSFAVHWIRAEIHEF
ILRNWRIVKVATTKAQRKLFFNLRSAKKRLGWLNRKEVDEVARDLGVSPKQVLEMEARLS
SQDTPFEGPNAENSEDDIPAPIAYLFDPTTDPARQMERLDQENHYGQRLQQALEALDPRS
RAIIHRRWLQESKSTLHELAAEYQISAERIRQLENNAIKKLRSMLTD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggaactgactgtacgcaatagtaatgggttcttggtgccggtggctgtgggggatctg
gatacctactgccaaactgtccatagcattcccatactaagcgcggaccaggagcacaat
ctggcccttcgccttagagatcatcatgacctggacgcagctcggcagttggtactctcc
caccttcgtttcgtggtccggattgcgcgaggatacagcggttatgggcttcccctggcc
gatttaatccaggaaggcaatattggcctcatgaaggcggtcaaacgcttcgatccagaa
caaggggtccgtctggtatccttcgctgtgcattggatccgggctgaaatccatgaattt
attcttcgcaactggcgcatcgtcaaagtagccaccaccaaggcccagcgcaaactattc
tttaatttgcggagcgctaaaaagcgcttgggctggctaaatcgaaaagaggtggatgag
gttgcccgtgatctaggagtcagtcctaagcaggtcttggaaatggaagcgcgcttgagc
agccaagacactccctttgagggccccaacgctgaaaatagcgaagacgacatccccgcg
ccgatcgcctatcttttcgatcctaccaccgacccggcgaggcaaatggagcggctggac
caagagaatcattacggccaacgtctacagcaggcactggaagcgctagatcctcggagc
cgtgcgattatccaccgccgttggcttcaagaaagcaaaagcaccttgcacgaactggct
gcggaataccaaatttctgccgagcgaatccgccagttggaaaataacgccatcaagaaa
ttgcgctctatgctgactgattaa
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