Nitrosococcus halophilus: Nhal_2438
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Entry
Nhal_2438 CDS
T01198
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
nhl
Nitrosococcus halophilus
Pathway
nhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Nhal_2438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_2438
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Nhal_2438
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Nhal_2438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ADE15526
UniProt:
D5BVU7
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All DBs
Position
2506708..2507457
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AA seq
249 aa
AA seq
DB search
MRVDLQPAYVLHLRPYRETSALVEIFTQDYGRVGLVAKGVRQRRSKAIGLLQPFCPLLLS
WVGRSDLVTLTGAEAAGRGPALTGEGLVCAFYLNELLLRLLPRRDPFEALFSVYAHSLPP
LANSQQRQQALRLFERDLLTYLGYGLTLTHEADTHRPIDAEQWYSYQLEKGPQRFQSEDL
GGMKVRGRTLQALARGELADPVSLHEAKQLLRWLLAFQLGDKPLKSRALLEELRQLGKAS
RKMKAHDCK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagggttgaccttcagcctgcctatgttcttcatctacgcccttatcgggagaccagc
gccctagtcgaaattttcactcaggattatgggcgggtcggattggttgccaaaggagtg
aggcaacggcgttccaaagccattggtttattacaaccattttgtcctttgttgctttct
tgggtaggtcggagtgatttggtgactctgactggagcggaggcagcgggtaggggaccc
gccttgacgggagaaggattggtctgcgccttttatcttaacgagctgctgttgcgcctg
ctaccgcgccgtgatccttttgaagccctattttcagtgtatgcccattcactcccgccg
ctggctaattcccagcagcggcagcaggctttgcgcttgtttgaacgagatttgctgacc
tacttggggtatgggctaaccttaacacatgaagccgatacccatcggccgatagacgcg
gagcaatggtatagttatcaattagagaaaggcccgcagcgattccaatcggaagatttg
ggagggatgaaggtccgaggacgtactttgcaggctttggcccggggagagttggcggat
cctgtgagtctgcacgaggctaagcagctgctacggtggttactagcctttcagctaggg
gataagcccctaaaaagccgggctctgttggaggaattacggcaattaggtaaagcaagc
agaaagatgaaagcccatgactgcaagtaa
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