Nitrosococcus halophilus: Nhal_2445
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Entry
Nhal_2445 CDS
T01198
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
nhl
Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nhl03009
]
Nhal_2445
Enzymes [BR:
nhl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Nhal_2445
Ribosome biogenesis [BR:
nhl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Nhal_2445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
PCMT
Methyltransf_11
Methyltransf_23
TRM5-TYW2_MTfase
Methyltransf_ANTKMT
RrnaAD
MTS
Cons_hypoth95
Methyltransf_12
PabTrmU54_TRAM_dom
DOT1
Methyltransf_15
TehB
TPMT
Methyltransf_4
CMAS
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
ADE15533
UniProt:
D5BVV4
LinkDB
All DBs
Position
2513225..2514565
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AA seq
446 aa
AA seq
DB search
MVQHPKRKRLSQEPQIGSIEALTHEGRGVARIDGKTVFIDGTLPGEKVLFHYVRRRSKFD
EGRLLEVLQPAPTRVEPRCRHFGVCGGCSLQHLSPGAQLQLKQETLTEQFRHFGGVEPEQ
WLTPLTGTDWGYRRKARLGVKFVKKKDRVLVGFREKGGRLIAALECCEVLHPSVGLLLPE
LGELIASLSCYDRIPQIEVAVGDNATGLVFRHLVPLTTADMEQLADFGRAHGLQIYLQGG
GIETLCLLWPESAELSYSQFENLEMVFLPTDFMQVNREVNSKMVQQVLALLELKSHDRVL
DLFCGVGNFTLPLASSGAEVVGVEGSAGLVARATANAKHNQLGNVNFEVADLNELDWVRH
AWAQNGFSKAVLDPPRSGALTAVQQMSALQVQRIVYVSCNPATLARDAGELVNRQGYHLR
YAGVMDMFPHTPHVETIALFEQARKN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggtacagcatcctaaacggaaaaggctctcccaagagccccagattggctccatcgag
gctttgacccatgaaggtcgcggtgtcgcccgcatcgatggtaagacggttttcatcgat
gggactctaccgggtgaaaaagtcctgtttcattatgtgcgtcggcgcagtaaattcgat
gaaggccgcttgctagaagtattgcagccggcaccaactcgggtggagccgcgttgccgc
cactttggagtctgtggtggttgtagcttgcaacatttgagtcccggagcccagttgcag
ctcaagcaagagaccttaacagaacaatttcgccactttggtggggttgaacccgagcag
tggctaacccctttgacgggaactgattggggatatcgccggaaggcgcggctaggagtc
aagttcgtcaaaaagaaggatcgtgtcctcgtcggttttcgggaaaaagggggacgtttg
attgcagcgcttgagtgttgtgaggtgctgcacccgtcggttggattgctgttgccagaa
ctcggggaacttatcgcttctttaagttgctatgatcgtattccccagatcgaggtagca
gtcggtgataatgccacaggtttggtgtttcgtcatctagtgcccctgactacagcggat
atggagcagctagcggattttggccgggcccatggtttgcagatttacctccaaggagga
gggatagagacattgtgcttgctgtggcctgaaagtgcggagctaagttactcccagttc
gagaatctggaaatggtcttcctgcctaccgattttatgcaggtaaacagggaggtgaat
agcaaaatggttcaacaggttctggcgctactggagcttaagtcccatgatcgagtgtta
gacctattctgtggagtgggtaactttaccctgccattggcaagttcaggggctgaggtg
gtgggggtagagggcagtgcggggctagttgctcgggcaacggctaatgcaaagcataat
cagttgggaaatgttaattttgaagtggctgatctcaatgagctggattgggttcgccat
gcttgggctcaaaatggtttttctaaagcagtgttagatccgccgcgaagcggagcattg
accgcagtccagcaaatgtcggcactgcaggtgcaacgaatcgtctatgtttcctgtaat
cctgctacccttgcccgggatgcgggggaattggtgaaccggcaaggctatcatttgcgc
tatgcgggggtgatggatatgttccctcataccccccatgtggaaaccattgctctgttt
gaacaggcaaggaagaactga
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