Nitrosococcus halophilus: Nhal_2683
Help
Entry
Nhal_2683 CDS
T01198
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nhl
Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nhl03016
]
Nhal_2683
Enzymes [BR:
nhl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Nhal_2683
Transfer RNA biogenesis [BR:
nhl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Nhal_2683
Prokaryotic type
Nhal_2683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADE15759
UniProt:
D5BX76
LinkDB
All DBs
Position
2752155..2753207
Genome browser
AA seq
350 aa
AA seq
DB search
MSEEPPFAYGAEAPPATALIRCCPEDFQVVEELPFSLSGEGEHVWLLLCKRNTNTVWLAR
RLARIAGVRSVDVGYAGLKDRHALTTQWFSVHLGRKKEPNWAAELETEAVQVVKIIRHPR
KLRRGALKENRFRLTLRRLQGDREVVLRRLVQIKAEGVPNYFGPQRFGREGQNLEQADQW
FAGGRPPKDRYLRGLLLSAARAFLFNQVLAERVRAAHWNQPLPGEALILDGSRGFFLAET
IDETLQARVRCFDCHPSGPLWGRGSLPTLGITRAFEEKVLADFGLWRKGLEEGGLKQERR
SLRLMAADLEWSFPADDSLRLCFRLPAGAYATTMLREVVGAQEAIGLSSP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaagaacccccttttgcctacggggcagaagcgcctcccgcaacggccctgatt
cgatgttgccccgaggacttccaggtggttgaggaacttccattttccctctcaggggag
ggcgagcatgtttggcttttgctctgtaagcgtaataccaacaccgtgtggttggcgcgt
cggcttgcccgtattgccggtgtgcggtcggtagatgtgggctatgcgggtttaaaggac
cgccatgctctaaccacccaatggttcagtgttcatttgggccggaaaaaagagcctaac
tgggccgcagagttagaaactgaagcggttcaagtggttaagattattcgtcacccccga
aaattacggcggggcgcgcttaaagaaaatcgtttccggttgactttacggcggctccaa
ggggatcgggaggtggttcttaggcgccttgtgcaaattaaggccgagggtgttcctaac
tatttcggaccccagagatttggtcgggagggccaaaatctggaacaagccgaccaatgg
tttgcggggggcaggccaccgaaggatcgctatctgcggggactgttactttcagcggcc
cgcgcttttttgtttaatcaggtcttagctgagcgagtacgggcggcccattggaatcaa
ccgcttcctggagaagcgcttattctcgatgggagtcgcgggttctttttagcggagact
atagatgaaaccttgcaagcccgggtgcggtgcttcgactgccatcctagtggcccttta
tggggacggggaagcctccccaccttggggataacccgtgcttttgaggagaaggtgttg
gcggactttggattatggcggaagggtctagaggaggggggcttaaagcaagagcgccgg
agtttaaggctgatggctgctgatttggaatggtcctttcctgctgacgatagcctgaga
ctttgttttcgtttacctgcaggggcctatgcgaccaccatgctgcgtgaagtggtgggg
gcccaggaggccatagggttatcctccccctaa
DBGET
integrated database retrieval system
