Nitrosococcus halophilus: Nhal_2969
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Entry
Nhal_2969 CDS
T01198
Name
(GenBank) UvrD/REP helicase
Organism
nhl
Nitrosococcus halophilus
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
AAA_30
MDY2_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADE16029
UniProt:
D5BYP1
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Position
3046067..3049546
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AA seq
1159 aa
AA seq
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MVNPSIPDAAARRQALNPHQSFIVQAPAGSGKTELLTQRYLVLLARVEAPEEIVAITFTR
KAAAEMRYRIVEALISARENQPPQAEPARTTWELARAVGRRDADKGWELERHPSRLRIQT
IDSLCASLTRQMPLLSRFGAQPGITEESENLYRQAARATLTEVESGAEWSASVEVLLRHL
NNDWGKIETLLSAMLARRDQWLRHLTDDKRLQQESLEEVLQAAIRAGLQKVSHCCPESVL
EEGLGFARFAADNLATLDPTSPIGICRDLWARPGIQIESLPQWLGLAQLLLTCEGEWRRQ
ATKAIGFPAPSAARNQEEKQFLKAQKQSFLNFLGRLGEKEDFRQALHSLRSLPPAHYTEA
QWALMEALFQLLPLAVAQLQLVFQERGEVDFTEVAQRAVVALGEAEAPTDLALTLDYQIR
HLLMDEFQDTSLSQYILLERLTTGWEPGDGRTLLVVGDPMQSIYRFREAEVGLYLQAWRQ
GVGQLPLVPLTLSVNFRSHQGVVDWVNHAFRQILPATEEIATGAVPYSASHAFHPPRAEQ
AVQVHPFFGKDLAEEAEVVVRLVEKIKQAALNSTIAILVRSRGHLAEIVPLLREAGLRFR
ALEIEPLGSRPVVQDLLALTKALFHLGDRLSWLTILRAPWCGLTLADLYILAGEDQQAAI
WDRIQDEDCIQRLSGEGRQRLARVRRVLAKAFAGRRRVSPRRWVEGAWLALGGPACVPES
TALEEASVYLDLLEQEAVADEILDFRALDEGVGRLFAPPDKLADETLQIMTIHRAKGLEF
DTVIVPGLGRSPRYESHQLLLWAERPASDSPSGNDNQLLLAPIAETGQQPDAIYHYIKGL
HEEKASFENGRLLYVAVTRAKHQLHLLGQVVLDKTDQPKAPPKRSLLASLWPAVKEEFEV
AAPSRRETCTQEEREDSLSFSEGGLFSRLSIQWQCPEPMPGVKTDIGGLPEAASALDPIE
FDWAGETARYMGTVVHRYLQLIAQEGLEHWNPARITGLGPALRRALMGQGVAANELENAL
ERTQEVLKQTLEDPRGRWILSSDHRQALNEYPLSGILNGRIIRAVIDRTFVDQEGVRWIV
DYKTGSHEGSDREAFLDREQERYRLQLESYGALVALKEPETQKIRLGLYYPQLCGWREWS
WSNPESSKDHHKGMKSVKK
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaccctagtatcccggatgctgccgcccgtcggcaggccctaaaccctcatcag
tctttcattgtccaggcgccagcgggttccggcaagacagaactgttgacccaacgttat
ttggtgttgttagcgcgagtggaggccccggaggaaatcgttgccatcacctttacccgc
aaggccgccgcggagatgcgttaccggattgtggaggctttaatcagcgcccgggagaac
cagccgccccaggccgagcctgctagaactacttgggagttggcccgtgcggtaggccgc
cgcgacgcagataagggctgggagttggagcgccatcccagccgtttgcgcattcagact
attgattccctctgcgccagtttgactcggcagatgcccctattgtcccggtttggtgct
caaccgggaattacagaagagtcggagaatctctaccgccaggctgcccgtgccaccttg
acggaggtggaaagcggtgcagagtggtctgcaagtgtggaggtcttgctacgtcatttg
aataatgattggggcaaaattgaaacgctgctctcggcgatgctcgcccgccgggatcaa
tggctgcgacatcttacggatgataaacggttgcagcaggagagcttagaagaggtgttg
caggctgctatccgggctggattgcagaaggtgagccattgttgccctgagtcggtgctg
gaggaggggttagggtttgcccgcttcgccgccgataatttggccacccttgaccccact
tcccccatcgggatttgtcgagatctttgggcccgacctggaatccaaattgagtcatta
ccccaatggctgggactggctcagcttttattgacctgtgagggagaatggcgcaggcaa
gcaaccaaggcaattgggttccctgcccctagtgccgcccgtaatcaagaagaaaagcaa
ttcctcaaggcgcaaaaacaatcttttttaaattttcttgggcgcttgggggaaaaagag
gactttcgccaggcgctgcatagcttgcgttcattacctcccgcccactacacggaggcc
cagtgggcccttatggaggccctgtttcagctcttacccttagccgtggcccaattgcaa
ttggtgtttcaggagcgaggcgaagtggactttaccgaggttgcccagcgggcggtggtt
gccctaggggaggctgaggcccccactgatctggccctgactctggattaccagattcgg
catttattaatggatgagttccaagataccagcctcagccaatatattttgctggaacgg
ttaacgacgggctgggaaccgggcgatggacggaccttgctggtcgttggcgatcccatg
cagtccatttatcgttttcgtgaggctgaagtgggactttatttgcaggcttggcggcaa
ggcgtaggacagttgccgctggtgcctttaactttatcggtgaactttcgctcccatcag
ggcgttgtggactgggtcaatcacgccttccgccagattttgccggcgaccgaggagatc
gctaccggcgccgttccctatagtgcctcccatgcttttcatccgccccgagcggagcag
gcggtccaggtccacccctttttcgggaaagacttggcggaagaggccgaagtggtggtc
cgtttggttgagaagataaagcaggccgcgctaaattctaccatcgccattctagtgcgt
agccggggacatttggctgagatagtgcctctgctgagggaagcggggttgcgtttccgg
gccttggagattgagcccttgggtagccgtccagtagtgcaagatttgttggccttgact
aaagccctgtttcatttgggagatcgccttagttggctgacaatactgcgcgcgccctgg
tgcggtttgaccttggccgatctctatattctggcaggcgaagatcagcaagccgcgatt
tgggatcgaatccaagatgaggattgtattcagcgtctaagcggggagggtcggcagcgc
cttgccagagttcgccgggtgttggccaaggcctttgcggggcggcggcgggtctcgcct
cgccggtgggtggaaggggcctggttagccctcggtggccccgcctgtgttcctgaatcc
acggcgcttgaggaggcttccgtttatctggatttgctagagcaagaggcggtggcggat
gagatcctcgatttcagagccctggatgagggggtaggacggctatttgctccgccggat
aaactcgcggatgaaacccttcagatcatgaccattcatcgagctaaggggttggagttc
gatacggtgattgtgcccggcctgggacgttcccctcgttatgaaagtcatcaattgctc
ctttgggcggagcgtccagcctctgatagcccgtcaggaaacgacaaccagctattgttg
gcgcccatcgccgagacggggcagcagcccgatgccatctatcactatattaagggactc
catgaggaaaaggctagtttcgaaaatggtcgtttgctctatgtggcggtaacccgggct
aaacaccaattacatctgctcgggcaggtggtgcttgataaaacagatcaacctaaggcg
cccccgaagcgctccctccttgcatccctgtggcctgcggtcaaagaagaatttgaagtt
gcagcaccttctaggagggaaacctgtacccaggaagaaagggaagattccctgagcttt
tcggaaggggggctcttttcccggctaagtatccagtggcaatgcccggagcctatgccg
ggagtaaagacggatattgggggtctcccggaggcggcttctgctttggatcccattgaa
tttgattgggccggagagaccgcccgttatatgggtacggtggttcatcgctatcttcaa
ctcattgcccaagaaggtctcgaacactggaacccagcccggatcacggggcttgggcct
gctcttcgccgagcgcttatggggcagggagtcgccgctaatgagttggaaaatgcgctg
gagcgtacccaggaggtactcaagcaaactcttgaagatcctcgggggcgttggatcctc
tcctcggaccatcgacaagcgctgaatgaatatcctttaagtggtattctaaatggtcgg
atcatccgggctgtcatcgaccgcacctttgtcgatcaggagggggttcgttggattgta
gattacaaaaccggtagccatgaagggagcgatagggaggcgtttttggatagggaacag
gaacgctatcgtctccaacttgagagttatggggctctagtggcccttaaagagcctgag
acccagaagatacgattgggactttattatcctcaactatgcggttggcgagagtggagc
tggtctaacccggagagttcaaaagatcatcacaaaggtatgaagagcgtaaagaaatga
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