Nitrosococcus halophilus: Nhal_3442
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Entry
Nhal_3442 CDS
T01198
Name
(GenBank) Ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
nhl
Nitrosococcus halophilus
Pathway
nhl00630
Glyoxylate and dicarboxylate metabolism
nhl00710
Carbon fixation by Calvin cycle
nhl01100
Metabolic pathways
nhl01110
Biosynthesis of secondary metabolites
nhl01120
Microbial metabolism in diverse environments
nhl01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Nhal_3442
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Nhal_3442
Enzymes [BR:
nhl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Nhal_3442
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ADE16469
UniProt:
D5C1B7
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All DBs
Position
3549389..3550867
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AA seq
492 aa
AA seq
DB search
MGKSETMAEGKERYKSGVIPYKKMGYWEPDYKPKETDIIAMFRITPQAGVDPAEAAAAVA
GESSTATWTVVWTDRLTACELYRAKAYRVDPVPNTGEGTKTEAQYFAYIAYDLDLFEPGS
IANLTASIIGNVFGFKAVKALRLEDMHIPVAYLKTFQGPATGVIVERERLDKFGRPLLGA
TTKPKLGLSGRNYGRVVYEALKGGLDFVKDDENINSQPFMHWRDRFLYCMEAVNKASAAT
GEVKGHYLNVTAATMEDMYERAEFAKSLGSVIIMIDLVVGYTAIQSMAKWARKNDMVLHL
HRAGNSTYSRQKNHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRERH
TPTSLEHGLFFDQDWASLNKVMPVASGGIHAGQMHQLLHYLGEDVVLQFGGGTIGHPQGI
QAGATANRVALEAMIMARNEGRDYMKEGPQILEDAAKWCSPLKAALDTWKDITFNYESTD
TADFVPTATTSV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcagaaacgatggctgaagggaaagagcgttataaatccggcgttatccct
tataaaaagatgggttattgggaacctgactacaagcccaaggaaaccgacatcatcgcg
atgtttcgtatcaccccgcaggccggtgtcgatcctgcggaagccgccgccgcagtagcg
ggcgaatcttctaccgccacctggacggtggtgtggacggatcgcctgaccgcctgcgaa
ctctaccgagccaaggcctaccgcgtagacccagtacccaacaccggcgaaggcaccaaa
accgaggcgcaatatttcgcctatattgcctatgatctggatctgttcgagccgggctcc
atcgccaacttgaccgcctcaatcatcggcaacgtgttcggtttcaaagcggtcaaggca
ctacgtttggaagacatgcacatcccggtagcttacctaaagactttccagggaccagcc
accggtgtcatcgtggagcgggagcgtttggataaattcggccgccccttactcggcgcc
accaccaagcctaaactcggcctttccggacgaaattacggtcgcgtagtctacgaggcc
ctgaaaggcggcctggacttcgtcaaagatgatgagaatatcaattcccagccgtttatg
cactggcgtgatcggttcctctactgcatggaagcggtcaataaggcctctgcagctacc
ggcgaagtcaagggacattacctcaatgtgactgcagccaccatggaagatatgtacgag
cgggctgaatttgctaaatcactgggttcagtcatcatcatgattgacctggtggtcggc
tacaccgctattcaatccatggccaaatgggcacggaagaatgacatggttctgcacctc
catcgcgccggcaactcaacctactcccggcaaaagaatcacggcatgaacttccgtgtg
atctgtaagtggatgcggatggccggtgtcgatcatatccatgccggtaccgtggtgggc
aagctagagggtgatcccctcatgattaaaggtttctacgacactttgcgggagcggcac
actccgacaagtctcgagcatggactcttctttgaccaagattgggcatccttgaataag
gtgatgccggtggcctctggtgggattcatgcgggccaaatgcatcagttactgcactat
cttggcgaagatgtggtgttgcagtttggtggtggcaccatcggtcacccccaaggtatt
caagcaggcgcgaccgccaaccgtgtggcccttgaagcgatgatcatggcacggaatgag
ggacgcgattacatgaaggaaggtccccaaatccttgaggatgccgccaagtggtgttcg
ccgctcaaggctgccctcgatacttggaaagatatcaccttcaattatgaatcgaccgat
accgccgacttcgtgccgacggccacgaccagcgtttga
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