Nitrosococcus halophilus: Nhal_3456
Help
Entry
Nhal_3456 CDS
T01198
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nhl
Nitrosococcus halophilus
Pathway
nhl03030
DNA replication
nhl03430
Mismatch repair
nhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nhal_3456
03430 Mismatch repair
Nhal_3456
03440 Homologous recombination
Nhal_3456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhl03032
]
Nhal_3456
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_3456
Enzymes [BR:
nhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nhal_3456
DNA replication proteins [BR:
nhl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nhal_3456
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nhal_3456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADE16483
UniProt:
D5C1D1
LinkDB
All DBs
Position
complement(3566459..3567187)
Genome browser
AA seq
242 aa
AA seq
DB search
MRQIILDTETTGLEPKEGHRIIEIGGVELINRRRTGQTFHCYLNPERRVDEGALKVHGLS
NEFLSDKPRFVEVAEEFLAFIREAELVIHNAPFDVGFLDHELSLLGSQWGKVSLYCQVLD
TLVLARQRHPGQKNSLDALCKRYGVDNSRRDLHGALLDAEILAGVYLAMTGGQASLSLRG
YGGEDSQSQPGEGKYRPVAAKRPPLKVVRASEEERSAHQARLAAIDKVSGGACLWHQIES
PD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaaattatactcgatactgagaccaccgggctggagcctaaagagggacatcga
atcattgaaattgggggggttgaactgatcaatcgacgccgtacggggcagacttttcat
tgctatctaaacccggagcggcgggtggatgaaggggctttgaaagtccacggcttgagc
aatgagtttttatcggataagccacgttttgtggaggttgccgaggaatttttagctttt
attagagaggcggaattggtcatccataatgcccctttcgatgtgggttttctggatcat
gagttgagcttattggggtctcagtggggaaaagtaagtctctactgtcaggtgctggat
acgttggtcctagcgcggcaacgtcatccaggccagaaaaacagtctagatgccctctgc
aagcgctatggggtggataactcccggcgggatttacacggcgctctcttggatgcggaa
atcttggctggagtgtatttggccatgactgggggtcaagccagtttaagcctgcgaggg
tatggtggcgaggacagccagtctcaaccgggagaggggaaatatcggcccgtcgcggct
aagcggccgccccttaaagtggtgcgggcaagcgaagaagagcggtcggcccatcaggcc
cgtcttgccgctattgataaggtgagtggcggtgcttgtttgtggcatcaaattgagtcg
ccagattag
DBGET
integrated database retrieval system
