Nitrosococcus halophilus: Nhal_3467
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Entry
Nhal_3467 CDS
T01198
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
nhl
Nitrosococcus halophilus
Pathway
nhl00730
Thiamine metabolism
nhl01100
Metabolic pathways
nhl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Nhal_3467
Enzymes [BR:
nhl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Nhal_3467
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ADE16494
UniProt:
D5C1E2
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Position
3576280..3578157
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AA seq
625 aa
AA seq
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MSAIPEKSLSTQAQVDEQAIQPFPNSRKIYVTGSRPDIRVPMREIRLSDTHTSHGLEKNL
PLTVYDTSGPYTDPEVKIDIRQGLPELRRAWIEERANTELLPDLSSAYGRQRNTDPKLDH
LRFAHLRPPRRANSGHNVTQMHYARQGIITPEMEFIALRENQRLEQYREQLLQQHPGQSF
GANLPSQITPEFVRSEVARGRAIIPANINHTELEPMIIGRNFLVKINANIGNSAVTSSIS
EEVDKMTWAIRWGADTVMDLSTGKNIHETREWIIRNAPVPIGTVPIYQALEKVGGKAEEL
TWEIFRDTLIEQAEQGVDYFTIHAGVLLAYIPLTANRVTGIVSRGGSIMAKWCLAHHRES
FLYTHFEEICEIMKAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTQIAWQHDVQT
MIEGPGHVPMHLIKENMEKQLTCCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGT
AMLCYVTPKEHLGLPNKNDVKEGIITYKIAAHAADLAKGHPSAQIRDNAMSKARFEFRWE
DQFNIGLDPDQAREYHDETLPQEAAKVAHFCSMCGPHFCSMKITQEVREYAHQKGLENDH
SALEQGMAEKAQEFREKGVEIYHKA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccattccggaaaagtctttgtctacccaggcccaggtggacgagcaagccatc
caaccctttcccaactcacgcaaaatctatgttaccggaagccgtcccgatattcgcgta
cccatgcgggaaatcaggctatccgatacccacacgagtcacgggctagaaaagaatctc
cccttaaccgtttatgacacttccggcccctatacggaccccgaggtgaaaattgatatc
cgccagggattaccggaactgcgacgggcctggatcgaggaacgggccaataccgagcta
ttgcccgatctttcctccgcatacggccgccaacggaatactgatcccaaactggatcac
ttgcgcttcgcccacttgcgcccaccacgtcgggccaactccgggcacaatgtgacccaa
atgcactatgcccggcaagggatcatcaccccggaaatggaatttattgcacttcgcgaa
aaccagcgcttggagcaataccgggagcaactgctccagcagcatccaggccaatccttt
ggggccaatctgccgtcccaaatcacccctgaatttgtgcgctcggaggttgcccgcggc
cgcgccattatccccgccaatatcaaccataccgaactggagcccatgattatcgggcgt
aattttttagtcaagatcaatgccaatattggcaattcagcggtaacttccagcatctcc
gaagaagtggacaaaatgacttgggccattcgctggggcgccgacacggtaatggatctc
tctaccggtaaaaatatccatgaaacccgggaatggatcattcgcaacgcccccgtcccc
attggcaccgtacctatctaccaagccttggagaaagtagggggcaaggccgaagaactg
acctgggagatcttccgcgatactttaattgaacaagcggaacaaggcgtagactacttc
accatccacgctggggtgctcctggcctatatccccctaaccgccaaccgagttactggt
attgtctcccggggcggctccatcatggccaaatggtgcctcgcccaccaccgggaaagt
ttcctctacacccacttcgaggaaatttgcgaaatcatgaaagcctatgatgtgtccttc
tccttaggagacggcctgcgacccggttccattgccgatgccaacgacgcagcccaattt
gcggaacttgaaaccctgggagagctaacccagattgcctggcaacacgatgtccagacc
atgattgaaggccctggccatgtgcccatgcacctgatcaaagaaaatatggaaaaacag
ttaacctgctgcggtgaagcccctttttacaccctcgggcctttgactactgacattgcg
ccgggctacgaccacatcacctccgggatcggggcagctatgattggctggtatggcacc
gccatgctgtgctatgtcacccccaaagaacacctcggattgcccaataaaaacgatgtc
aaggaagggattattacttacaaaatcgcggcccatgcggccgatctggccaaaggccac
cccagcgcacaaatccgggataacgccatgtcgaaagcgcgcttcgagttccgctgggaa
gatcaattcaacattggcttagaccctgaccaggcccgggaataccatgatgaaacctta
ccccaggaagcggccaaagtggcccatttctgctccatgtgtggtccccatttctgctcc
atgaagatcactcaagaagtgcgtgaatatgcccatcaaaagggcctggaaaacgaccat
tccgccctagaacaagggatggcggaaaaagcccaggaatttcgagaaaagggggtggaa
atttaccacaaagcctga
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