Nitrosococcus halophilus: Nhal_3524
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Entry
Nhal_3524 CDS
T01198
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
nhl
Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_3524
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Nhal_3524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
ChlI
AAA_22
DnaB_C
AAA_16
PAXNEB
Rad51
DUF7125
AAA_24
SLFN-g3_helicase
ABC_tran
AAA_30
RecA
AAA
nSTAND3
NTPase_1
AAA_14
CobU
AAA_11
NACHT
DUF7129
GvpD_bR2
ATPase_2
AAA_19
DZR
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADE16548
UniProt:
D5C1J6
LinkDB
All DBs
Position
complement(3623746..3625116)
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AA seq
456 aa
AA seq
DB search
MGKSKTVYQCNQCGAETIRWAGQCPGCGAWNSLEEQLRAQLPKRTGRYAHYAGALSTVQP
LAEVQVEGEVRLSTGLSELDRVLGGGLVAGSVVLIGGDPGIGKSTLLLQALAKLGTIQEG
RVLYLTGEESLAQISLRAQRLGLGTAPVRLLADTLVERVLAVVQQERPEVMVVDSIQTLY
TEQLQSAPGTVTQVRESAGQLLRFAKQSGTAVILVGHVTKEGALAGPRVLEHMVDTVLYF
EGDGGERLRVLRAAKNRFGAANELGVFAMTERGLRGVTNPSAIFLSRGKEAVPGSAVTVI
REGSRPLLVEVQALVDDSHLANPRRVTVGLEPNRLAMLLAILHRHGAVMPGAQDVFVNVV
GGVRVHETGADLAVLAAIVSSLRDRPLGQELVLFGEVGLTGEIRPVPGGEERLAAAAKHG
FKKAILPQGNTPRRSVENITIVPVSRLAEVLEALRE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgggaaagtccaaaactgtttatcagtgcaatcaatgtggtgccgagacgattcgttgg
gccggccaatgccccggctgcggcgcctggaatagtctggaggagcaactaagagcccaa
ttaccgaagcggactgggcgctatgcccattatgctggtgcgctgagtacggtgcagccc
ttggcggaggttcaggtcgagggtgaggtgcgcctgtcgacgggcctatccgagttggat
cgggtcttggggggagggttagtggctggctcagtggtgctcattggcggagatcccggg
attggcaaatccactttgttattacaggctttagcgaaattggggactatccaagagggt
cgggtgctgtatttaaccggggaggaatccctggcccaaatcagcctcagggcccagcgc
ttgggattgggaaccgcgccggtacgtttgctggcggatactctagtggagcgggtcctg
gccgttgtccagcaagagcggcccgaggtaatggtggtcgactctattcagactttatat
acggagcagttacaatcagcaccgggaacggtgactcaagtgcgggaaagcgccggacaa
ttgctgcgttttgctaagcaaagcgggactgcagtaatcctagtgggccatgtgaccaag
gaaggggcgttggcgggacctcgagtcctggagcatatggtcgatacggtgctttacttc
gagggcgatgggggagaacggcttcgggtgctgcgggcggcaaagaatcgcttcggcgcg
gctaacgagctgggagttttcgccatgaccgagcgggggctgcggggcgtgaccaatccc
tcagccatctttctctcccgggggaaggaagcggttcccgggagcgccgtcaccgtgatc
cgggaaggcagccgtcctttgctggtggaagtccaggccttagtggatgacagccatctt
gccaacccccgccgggtcacggtgggtttggagcccaatcgcttagctatgttgctggcc
attctgcaccgccatggggcggttatgccaggagcccaggatgtgtttgtcaatgtggta
gggggagtgcgagtccacgaaacgggcgctgatctggcggtcctggccgctattgtttcc
agcttgcgggataggcctctaggccaggagttggtattgttcggagaagtgggcttgacc
ggggaaatccgccccgtgcccgggggggaagaacgtttggccgctgctgccaagcatggt
tttaaaaaggccattctgccccagggaaataccccgagacggtcggttgagaatatcacc
attgttccggtaagccgtctagctgaggtgttggaggcgcttcgggagtga
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