Nitrosococcus halophilus: Nhal_3731
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Entry
Nhal_3731 CDS
T01198
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nhl
Nitrosococcus halophilus
Pathway
nhl03030
DNA replication
nhl03430
Mismatch repair
nhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nhal_3731
03430 Mismatch repair
Nhal_3731
03440 Homologous recombination
Nhal_3731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhl03032
]
Nhal_3731
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_3731
Enzymes [BR:
nhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nhal_3731
DNA replication proteins [BR:
nhl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nhal_3731
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nhal_3731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
RuvB_N
AAA_18
AAA_14
AAA_2
AAA_5
PIF1
AAA_30
TsaE
SKI
nSTAND3
AAA_7
DNA_pol3_a_NII
AAA_19
AAA_assoc_2
AAA_28
Rad17
Mg_chelatase
ABC_tran
AAA_24
RNA_helicase
NB-ARC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ADE16751
UniProt:
D5C2S6
LinkDB
All DBs
Position
3847234..3848829
Genome browser
AA seq
531 aa
AA seq
DB search
MSYQVLARKWRPRNFTQLVGQEHVVRALINGLDNDRLHHAFLFTGTRGVGKTTLARILAK
SLNCEEGVGSTPCGNCQNCQAIDAGSFVDLIEVDAASRTGVDDTRELLENVHYAPSRGRY
KVYLIDEVHMFSTSSFNALLKTLEEPPPHIKFLLATTDPKKLPVTVLSRCLQFNLRRITP
QVIASHLDKILSEEQIPSEFQALTLIARTAEGSMRDALSLLDQAISYGGGQVTTTDVRTM
LGNIEQRDLLVLLDALLAGNGQELIGKVREICDNSVDIPSILADLLHLLQRLALYQFAPD
TVDDIDEREAFHGLAARMTPEDVQLFYQIGLIGSRDLAYAPDPRGAFEMILLRMLCFHPV
SGASSHQPSADTVPKAEKTRAVPSVPPTVSQPNTPPLSNSDHWPKLVTQLQLTAVARQLA
ENCALERCEKDTVYLQLAPNMANLHNKRAEERLRQALEEHYGKSIQLIIRIADSTTDIDT
AAARREKEHAAWQQAAVESIEKDANIKALRETFNARLPLDSVRPLTKPEQE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagtcctcgcacgaaaatggcgacctcgtaacttcacccaattggtgggc
caagagcatgtggtccgggctttaatcaatggcctggataatgaccgcttgcatcatgcc
tttctatttacggggactcggggtgtaggcaaaacgactctggcccgcattcttgccaaa
tcccttaattgcgaggagggagtaggatcgacaccctgcggcaattgccagaactgtcag
gcaattgatgccgggagttttgtggatctcatcgaagtagatgccgcatctcgcacggga
gtagatgatacccgcgaattattagaaaacgttcactatgcgccaagccgcggtcgctat
aaagtttatcttatcgatgaagtccacatgttctccacatcaagtttcaacgccttgctc
aaaactttggaagaaccgccgcctcacatcaagtttctgctagccaccacagatcccaaa
aaattacctgtgacggtgctttcccgctgtctccagtttaacctgcggcgtatcaccccc
caagtcattgctagccacttggataagatcctcagtgaagaacaaattccctcagagttt
caagcattgactttgatcgcccggactgctgaaggcagcatgcgtgacgccctcagcctt
ctagatcaggccatcagctatggcggggggcaagtaacgacaaccgacgtacgcaccatg
ctaggcaacattgaacagcgagacttactagtactgctcgacgcccttctagcgggcaat
ggacaagaattaattggaaaagtacgggaaatctgcgacaactcagtcgatatcccctcg
atactggcagatttgctgcatttattacaacggcttgccctctaccaattcgccccagac
acggttgacgatatcgatgagcgcgaggcgtttcatggccttgctgcacggatgacgcct
gaggatgttcagttattttaccaaattggacttattggcagccgcgaccttgcctatgca
cctgatccgcgtggggcgtttgaaatgatactattacggatgttgtgttttcatccagtc
agtggcgcttcctcccaccagccctccgctgatactgttcccaaagcagaaaaaacaaga
gcggttccgtccgttccacctacggtatcacagcccaacactcctcccctttcaaacagc
gatcattggccaaaactagtcacccagctacaattaactgctgttgcccggcaactggca
gaaaattgtgccctagaacggtgcgaaaaagataccgtatatttgcagctagcaccgaat
atggccaaccttcacaacaaacgcgcggaggaacgtctacggcaagctctagaagagcat
tatggcaagtcgattcaattaattattcggattgcagattcaacaaccgacattgataca
gcggcagccagacgtgaaaaggaacatgcagcatggcaacaagctgcagtagagtctatt
gaaaaagatgccaacattaaagcacttcgtgaaacctttaatgcccggctgcccctagac
agtgtccgtcccctcacgaagcccgaacaggaataa
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